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Cluster: A36.bin_4_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A36_contig_79 A36_contig_79_50 48668 50626 + 9.B.18.2.1
pfam A36_contig_79 A36_contig_79_51 50629 51840 + Aminotran_1_2 | DegT_DnrJ_EryC1
TC A36_contig_79 A36_contig_79_52 51834 52532 + 9.B.18.1.3
CAZyme A36_contig_79 A36_contig_79_53 52552 53772 + GT4
CAZyme A36_contig_79 A36_contig_79_54 53775 54851 + GT2
CAZyme A36_contig_79 A36_contig_79_55 54853 55938 + GT4
CAZyme A36_contig_79 A36_contig_79_56 55957 57027 + GT113
NULL(UNKNOWN) A36_contig_79 A36_contig_79_57 57044 58453 + NULL(UNKNOWN)
[View Structural Homologs]
TC A36_contig_79 A36_contig_79_58 58450 59901 + 2.A.66.2.16
STP A36_contig_79 A36_contig_79_59 60179 61288 + Aminotran_1_2
pfam A36_contig_79 A36_contig_79_60 61318 62841 + Wzy_C
TC A36_contig_79 A36_contig_79_61 62856 63653 + 9.B.18.1.3
Gene ID: A36_contig_79_50
Type: TC
Location: 48668 - 50626 (+)
Gene ID: A36_contig_79_51
Type: pfam
Location: 50629 - 51840 (+)
Gene ID: A36_contig_79_52
Type: TC
Location: 51834 - 52532 (+)
Gene ID: A36_contig_79_53
Type: CAZyme
Location: 52552 - 53772 (+)
Gene ID: A36_contig_79_54
Type: CAZyme
Location: 53775 - 54851 (+)
Gene ID: A36_contig_79_55
Type: CAZyme
Location: 54853 - 55938 (+)
Gene ID: A36_contig_79_56
Type: CAZyme
Location: 55957 - 57027 (+)
Gene ID: A36_contig_79_57
Type:
Location: 57044 - 58453 (+)
Gene ID: A36_contig_79_58
Type: TC
Location: 58450 - 59901 (+)
Gene ID: A36_contig_79_59
Type: STP
Location: 60179 - 61288 (+)
Gene ID: A36_contig_79_60
Type: pfam
Location: 61318 - 62841 (+)
Gene ID: A36_contig_79_61
Type: TC
Location: 62856 - 63653 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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