Cluster: A36.bin_4_CGC19
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 5
- Substrate:
- Genome ID: A36.bin_4
- CGC Family ID: CGCFAM_04292
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A36_contig_178 | A36_contig_178_1630 | 1746572 | 1747606 | - | GT2 |
| pfam | A36_contig_178 | A36_contig_178_1631 | 1747545 | 1748804 | - | LytR_cpsA_psr |
| TC | A36_contig_178 | A36_contig_178_1632 | 1748819 | 1750180 | - | 9.B.18.1.1 |
| pfam | A36_contig_178 | A36_contig_178_1633 | 1750461 | 1751987 | - | DUF4367 |
| STP | A36_contig_178 | A36_contig_178_1634 | 1751987 | 1752502 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | A36_contig_178 | A36_contig_178_1635 | 1752718 | 1753677 | - | GT2 |
| CAZyme | A36_contig_178 | A36_contig_178_1636 | 1753685 | 1755526 | - | GT2 | GT2 |
| pfam | A36_contig_178 | A36_contig_178_1637 | 1755549 | 1756097 | - | Germane |
| NULL(UNKNOWN) | A36_contig_178 | A36_contig_178_1638 | 1756145 | 1756744 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A36_contig_178 | A36_contig_178_1639 | 1756757 | 1757491 | - | 3.A.1.103.1 |
| TC | A36_contig_178 | A36_contig_178_1640 | 1757504 | 1758280 | - | 3.A.1.103.6 |
| pfam | A36_contig_178 | A36_contig_178_1641 | 1758304 | 1758855 | - | dTDP_sugar_isom |
| pfam | A36_contig_178 | A36_contig_178_1642 | 1758872 | 1759741 | - | NTP_transferase | NTP_transf_3 |
| CAZyme | A36_contig_178 | A36_contig_178_1643 | 1759979 | 1761979 | - | GH73 |
| NULL(UNKNOWN) | A36_contig_178 | A36_contig_178_1644 | 1762021 | 1762845 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A36_contig_178 | A36_contig_178_1645 | 1762928 | 1764325 | - | ALGX |
| TC | A36_contig_178 | A36_contig_178_1646 | 1764341 | 1765747 | - | 2.A.50.2.1 |
| pfam | A36_contig_178 | A36_contig_178_1647 | 1765760 | 1767415 | - | SLH | SLH | SLH | Transglut_core | GBS_Bsp-like |
| pfam | A36_contig_178 | A36_contig_178_1648 | 1767435 | 1769381 | - | RgpF |
| CAZyme | A36_contig_178 | A36_contig_178_1649 | 1769452 | 1770645 | - | GT2 |
Gene ID: A36_contig_178_1630
Type: CAZyme
Location: 1746572 - 1747606 (-)
Type: CAZyme
Location: 1746572 - 1747606 (-)
Gene ID: A36_contig_178_1631
Type: pfam
Location: 1747545 - 1748804 (-)
Type: pfam
Location: 1747545 - 1748804 (-)
Gene ID: A36_contig_178_1632
Type: TC
Location: 1748819 - 1750180 (-)
Type: TC
Location: 1748819 - 1750180 (-)
Gene ID: A36_contig_178_1633
Type: pfam
Location: 1750461 - 1751987 (-)
Type: pfam
Location: 1750461 - 1751987 (-)
Gene ID: A36_contig_178_1634
Type: STP
Location: 1751987 - 1752502 (-)
Type: STP
Location: 1751987 - 1752502 (-)
Gene ID: A36_contig_178_1635
Type: CAZyme
Location: 1752718 - 1753677 (-)
Type: CAZyme
Location: 1752718 - 1753677 (-)
Gene ID: A36_contig_178_1636
Type: CAZyme
Location: 1753685 - 1755526 (-)
Type: CAZyme
Location: 1753685 - 1755526 (-)
Gene ID: A36_contig_178_1637
Type: pfam
Location: 1755549 - 1756097 (-)
Type: pfam
Location: 1755549 - 1756097 (-)
Gene ID: A36_contig_178_1638
Type:
Location: 1756145 - 1756744 (-)
Type:
Location: 1756145 - 1756744 (-)
Gene ID: A36_contig_178_1639
Type: TC
Location: 1756757 - 1757491 (-)
Type: TC
Location: 1756757 - 1757491 (-)
Gene ID: A36_contig_178_1640
Type: TC
Location: 1757504 - 1758280 (-)
Type: TC
Location: 1757504 - 1758280 (-)
Gene ID: A36_contig_178_1641
Type: pfam
Location: 1758304 - 1758855 (-)
Type: pfam
Location: 1758304 - 1758855 (-)
Gene ID: A36_contig_178_1642
Type: pfam
Location: 1758872 - 1759741 (-)
Type: pfam
Location: 1758872 - 1759741 (-)
Gene ID: A36_contig_178_1643
Type: CAZyme
Location: 1759979 - 1761979 (-)
Type: CAZyme
Location: 1759979 - 1761979 (-)
Gene ID: A36_contig_178_1644
Type:
Location: 1762021 - 1762845 (-)
Type:
Location: 1762021 - 1762845 (-)
Gene ID: A36_contig_178_1645
Type: pfam
Location: 1762928 - 1764325 (-)
Type: pfam
Location: 1762928 - 1764325 (-)
Gene ID: A36_contig_178_1646
Type: TC
Location: 1764341 - 1765747 (-)
Type: TC
Location: 1764341 - 1765747 (-)
Gene ID: A36_contig_178_1647
Type: pfam
Location: 1765760 - 1767415 (-)
Type: pfam
Location: 1765760 - 1767415 (-)
Gene ID: A36_contig_178_1648
Type: pfam
Location: 1767435 - 1769381 (-)
Type: pfam
Location: 1767435 - 1769381 (-)
Gene ID: A36_contig_178_1649
Type: CAZyme
Location: 1769452 - 1770645 (-)
Type: CAZyme
Location: 1769452 - 1770645 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas umbilicata
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.