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Cluster: A36.bin_4_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A36_contig_178 A36_contig_178_1400 1482135 1482701 - 2.A.107.1.2
TC A36_contig_178 A36_contig_178_1401 1482818 1484374 - 2.A.49.5.5
TC A36_contig_178 A36_contig_178_1402 1484434 1486161 - 3.A.1.106.3
TC A36_contig_178 A36_contig_178_1403 1486180 1488045 - 3.A.1.106.3
peptidase A36_contig_178 A36_contig_178_1404 1488476 1490587 - X52.001
pfam A36_contig_178 A36_contig_178_1405 1490600 1491766 - DUF6070
CAZyme A36_contig_178 A36_contig_178_1406 1491962 1492660 - GT51
NULL(UNKNOWN) A36_contig_178 A36_contig_178_1407 1492699 1493217 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) A36_contig_178 A36_contig_178_1408 1493258 1494427 - NULL(UNKNOWN)
[View Structural Homologs]
TC A36_contig_178 A36_contig_178_1409 1494488 1496056 - 3.A.1.147.6
TC A36_contig_178 A36_contig_178_1410 1496046 1496762 - 3.A.1.147.6
TF A36_contig_178 A36_contig_178_1411 1496836 1497786 - HTH_AraC
TC A36_contig_178 A36_contig_178_1412 1497956 1499299 + 2.A.66.1.33
pfam A36_contig_178 A36_contig_178_1413 1499394 1500248 - ABC_trans_CmpB
STP A36_contig_178 A36_contig_178_1414 1500467 1500700 + FeoA
TC A36_contig_178 A36_contig_178_1415 1500693 1502738 + 9.A.8.1.9
peptidase A36_contig_178 A36_contig_178_1416 1502802 1503251 - A24.UNA
pfam A36_contig_178 A36_contig_178_1417 1503297 1504115 - PHP | PHP_C
TC A36_contig_178 A36_contig_178_1418 1504326 1505954 - 2.A.58.2.2
Gene ID: A36_contig_178_1400
Type: TC
Location: 1482135 - 1482701 (-)
Gene ID: A36_contig_178_1401
Type: TC
Location: 1482818 - 1484374 (-)
Gene ID: A36_contig_178_1402
Type: TC
Location: 1484434 - 1486161 (-)
Gene ID: A36_contig_178_1403
Type: TC
Location: 1486180 - 1488045 (-)
Gene ID: A36_contig_178_1404
Type: peptidase
Location: 1488476 - 1490587 (-)
Gene ID: A36_contig_178_1405
Type: pfam
Location: 1490600 - 1491766 (-)
Gene ID: A36_contig_178_1406
Type: CAZyme
Location: 1491962 - 1492660 (-)
Gene ID: A36_contig_178_1407
Type:
Location: 1492699 - 1493217 (-)
Gene ID: A36_contig_178_1408
Type:
Location: 1493258 - 1494427 (-)
Gene ID: A36_contig_178_1409
Type: TC
Location: 1494488 - 1496056 (-)
Gene ID: A36_contig_178_1410
Type: TC
Location: 1496046 - 1496762 (-)
Gene ID: A36_contig_178_1411
Type: TF
Location: 1496836 - 1497786 (-)
Gene ID: A36_contig_178_1412
Type: TC
Location: 1497956 - 1499299 (+)
Gene ID: A36_contig_178_1413
Type: pfam
Location: 1499394 - 1500248 (-)
Gene ID: A36_contig_178_1414
Type: STP
Location: 1500467 - 1500700 (+)
Gene ID: A36_contig_178_1415
Type: TC
Location: 1500693 - 1502738 (+)
Gene ID: A36_contig_178_1416
Type: peptidase
Location: 1502802 - 1503251 (-)
Gene ID: A36_contig_178_1417
Type: pfam
Location: 1503297 - 1504115 (-)
Gene ID: A36_contig_178_1418
Type: TC
Location: 1504326 - 1505954 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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