Cluster: A36.bin_4_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A36.bin_4
- CGC Family ID: CGCFAM_00334
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A36_contig_178 | A36_contig_178_724 | 756983 | 758542 | - | 3.A.3.4.1 |
| TF | A36_contig_178 | A36_contig_178_725 | 759085 | 759936 | - | HTH_AraC | HTH_AraC |
| CAZyme | A36_contig_178 | A36_contig_178_726 | 760099 | 763164 | + | GH2 |
| TC | A36_contig_178 | A36_contig_178_727 | 763171 | 764550 | + | 2.A.2.3.3 |
Gene ID: A36_contig_178_724
Type: TC
Location: 756983 - 758542 (-)
Type: TC
Location: 756983 - 758542 (-)
Gene ID: A36_contig_178_725
Type: TF
Location: 759085 - 759936 (-)
Type: TF
Location: 759085 - 759936 (-)
Gene ID: A36_contig_178_726
Type: CAZyme
Location: 760099 - 763164 (+)
Type: CAZyme
Location: 760099 - 763164 (+)
Gene ID: A36_contig_178_727
Type: TC
Location: 763171 - 764550 (+)
Type: TC
Location: 763171 - 764550 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas umbilicata
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A36_contig_178_727 | vegan > omnivore | 1.68616 | 0.00878 |