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Cluster: A36.bin_19_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A36_contig_1370 A36_contig_1370_437 538613 539695 + GT28
STP A36_contig_1370 A36_contig_1370_438 539852 540493 - Sigma70_r2 | Sigma70_r4_2
pfam A36_contig_1370 A36_contig_1370_439 540569 540985 - HIT | DcpS_C
TC A36_contig_1370 A36_contig_1370_440 541062 541694 - 9.B.104.1.3
TC A36_contig_1370 A36_contig_1370_441 542149 543453 - 2.A.56.1.5
TC A36_contig_1370 A36_contig_1370_442 543457 543936 - 2.A.56.1.5
TC A36_contig_1370 A36_contig_1370_443 543936 544937 - 2.A.56.1.5
Gene ID: A36_contig_1370_437
Type: CAZyme
Location: 538613 - 539695 (+)
Gene ID: A36_contig_1370_438
Type: STP
Location: 539852 - 540493 (-)
Gene ID: A36_contig_1370_439
Type: pfam
Location: 540569 - 540985 (-)
Gene ID: A36_contig_1370_440
Type: TC
Location: 541062 - 541694 (-)
Gene ID: A36_contig_1370_441
Type: TC
Location: 542149 - 543453 (-)
Gene ID: A36_contig_1370_442
Type: TC
Location: 543457 - 543936 (-)
Gene ID: A36_contig_1370_443
Type: TC
Location: 543936 - 544937 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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