Cluster: A36.bin_19_CGC26
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: A36.bin_19
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A36_contig_517 | A36_contig_517_225 | 225551 | 226717 | - | GH31_2 |
| pfam | A36_contig_517 | A36_contig_517_226 | 227382 | 228164 | - | PNP_UDP_1 |
| TC | A36_contig_517 | A36_contig_517_227 | 228461 | 229678 | - | 2.A.23.1.2 |
| pfam | A36_contig_517 | A36_contig_517_228 | 229710 | 231227 | - | GD_AH_second | SAF | GD_AH_C |
| TF | A36_contig_517 | A36_contig_517_229 | 231490 | 232467 | + | HTH_1 |
| TC | A36_contig_517 | A36_contig_517_230 | 232727 | 234037 | - | 2.A.56.1.5 |
| pfam | A36_contig_517 | A36_contig_517_231 | 234039 | 234542 | - | DctQ |
| TC | A36_contig_517 | A36_contig_517_232 | 234543 | 235565 | - | 2.A.56.1.5 |
| TF | A36_contig_517 | A36_contig_517_233 | 236267 | 237058 | - | HTH_AraC |
| TC | A36_contig_517 | A36_contig_517_234 | 237030 | 238406 | - | 9.B.33.1.1 |
| pfam | A36_contig_517 | A36_contig_517_235 | 238530 | 240833 | - | SpoIID |
| TC | A36_contig_517 | A36_contig_517_236 | 240843 | 242117 | - | 2.A.86.1.8 |
Gene ID: A36_contig_517_225
Type: CAZyme
Location: 225551 - 226717 (-)
Type: CAZyme
Location: 225551 - 226717 (-)
Gene ID: A36_contig_517_226
Type: pfam
Location: 227382 - 228164 (-)
Type: pfam
Location: 227382 - 228164 (-)
Gene ID: A36_contig_517_227
Type: TC
Location: 228461 - 229678 (-)
Type: TC
Location: 228461 - 229678 (-)
Gene ID: A36_contig_517_228
Type: pfam
Location: 229710 - 231227 (-)
Type: pfam
Location: 229710 - 231227 (-)
Gene ID: A36_contig_517_229
Type: TF
Location: 231490 - 232467 (+)
Type: TF
Location: 231490 - 232467 (+)
Gene ID: A36_contig_517_230
Type: TC
Location: 232727 - 234037 (-)
Type: TC
Location: 232727 - 234037 (-)
Gene ID: A36_contig_517_231
Type: pfam
Location: 234039 - 234542 (-)
Type: pfam
Location: 234039 - 234542 (-)
Gene ID: A36_contig_517_232
Type: TC
Location: 234543 - 235565 (-)
Type: TC
Location: 234543 - 235565 (-)
Gene ID: A36_contig_517_233
Type: TF
Location: 236267 - 237058 (-)
Type: TF
Location: 236267 - 237058 (-)
Gene ID: A36_contig_517_234
Type: TC
Location: 237030 - 238406 (-)
Type: TC
Location: 237030 - 238406 (-)
Gene ID: A36_contig_517_235
Type: pfam
Location: 238530 - 240833 (-)
Type: pfam
Location: 238530 - 240833 (-)
Gene ID: A36_contig_517_236
Type: TC
Location: 240843 - 242117 (-)
Type: TC
Location: 240843 - 242117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola catenula
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.