Cluster: A36.bin_19_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: A36.bin_19
- CGC Family ID: CGCFAM_03087
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A36_contig_250 | A36_contig_250_1670 | 1947573 | 1948973 | - | 3.A.2.1.5 |
| TC | A36_contig_250 | A36_contig_250_1671 | 1949045 | 1949938 | - | 3.A.2.1.5 |
| TC | A36_contig_250 | A36_contig_250_1672 | 1949905 | 1951443 | - | 3.A.2.1.5 |
| pfam | A36_contig_250 | A36_contig_250_1673 | 1951457 | 1951972 | - | OSCP |
| pfam | A36_contig_250 | A36_contig_250_1674 | 1951965 | 1952456 | - | ATP-synt_B |
| TC | A36_contig_250 | A36_contig_250_1675 | 1952517 | 1952741 | - | 3.A.2.1.5 |
| TC | A36_contig_250 | A36_contig_250_1676 | 1952839 | 1953525 | - | 3.A.2.1.5 |
| STP | A36_contig_250 | A36_contig_250_1677 | 1953993 | 1955024 | - | PfkB |
| CAZyme | A36_contig_250 | A36_contig_250_1678 | 1955422 | 1956618 | - | GH105 |
| CAZyme | A36_contig_250 | A36_contig_250_1679 | 1956764 | 1958986 | - | GH28 |
| CAZyme | A36_contig_250 | A36_contig_250_1680 | 1959055 | 1960155 | - | CE19 |
| TC | A36_contig_250 | A36_contig_250_1681 | 1960148 | 1961671 | - | 2.A.80.1.1 |
Gene ID: A36_contig_250_1670
Type: TC
Location: 1947573 - 1948973 (-)
Type: TC
Location: 1947573 - 1948973 (-)
Gene ID: A36_contig_250_1671
Type: TC
Location: 1949045 - 1949938 (-)
Type: TC
Location: 1949045 - 1949938 (-)
Gene ID: A36_contig_250_1672
Type: TC
Location: 1949905 - 1951443 (-)
Type: TC
Location: 1949905 - 1951443 (-)
Gene ID: A36_contig_250_1673
Type: pfam
Location: 1951457 - 1951972 (-)
Type: pfam
Location: 1951457 - 1951972 (-)
Gene ID: A36_contig_250_1674
Type: pfam
Location: 1951965 - 1952456 (-)
Type: pfam
Location: 1951965 - 1952456 (-)
Gene ID: A36_contig_250_1675
Type: TC
Location: 1952517 - 1952741 (-)
Type: TC
Location: 1952517 - 1952741 (-)
Gene ID: A36_contig_250_1676
Type: TC
Location: 1952839 - 1953525 (-)
Type: TC
Location: 1952839 - 1953525 (-)
Gene ID: A36_contig_250_1677
Type: STP
Location: 1953993 - 1955024 (-)
Type: STP
Location: 1953993 - 1955024 (-)
Gene ID: A36_contig_250_1678
Type: CAZyme
Location: 1955422 - 1956618 (-)
Type: CAZyme
Location: 1955422 - 1956618 (-)
Gene ID: A36_contig_250_1679
Type: CAZyme
Location: 1956764 - 1958986 (-)
Type: CAZyme
Location: 1956764 - 1958986 (-)
Gene ID: A36_contig_250_1680
Type: CAZyme
Location: 1959055 - 1960155 (-)
Type: CAZyme
Location: 1959055 - 1960155 (-)
Gene ID: A36_contig_250_1681
Type: TC
Location: 1960148 - 1961671 (-)
Type: TC
Location: 1960148 - 1961671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola catenula
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.