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Cluster: A36.bin_19_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A36_contig_250 A36_contig_250_1654 1929606 1932293 + GT51
pfam A36_contig_250 A36_contig_250_1655 1932319 1932705 - SpoVAC_SpoVAEB
TC A36_contig_250 A36_contig_250_1656 1932896 1933912 - 9.A.11.1.1
NULL(UNKNOWN) A36_contig_250 A36_contig_250_1657 1934134 1934349 + NULL(UNKNOWN)
[View Structural Homologs]
TC A36_contig_250 A36_contig_250_1658 1934346 1934981 + 9.A.11.1.1
pfam A36_contig_250 A36_contig_250_1659 1934968 1935420 + SpoVAB
TC A36_contig_250 A36_contig_250_1660 1935464 1935919 + 9.A.11.1.1
Gene ID: A36_contig_250_1654
Type: CAZyme
Location: 1929606 - 1932293 (+)
Gene ID: A36_contig_250_1655
Type: pfam
Location: 1932319 - 1932705 (-)
Gene ID: A36_contig_250_1656
Type: TC
Location: 1932896 - 1933912 (-)
Gene ID: A36_contig_250_1657
Type:
Location: 1934134 - 1934349 (+)
Gene ID: A36_contig_250_1658
Type: TC
Location: 1934346 - 1934981 (+)
Gene ID: A36_contig_250_1659
Type: pfam
Location: 1934968 - 1935420 (+)
Gene ID: A36_contig_250_1660
Type: TC
Location: 1935464 - 1935919 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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