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Cluster: A36.bin_19_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A36_contig_250 A36_contig_250_1311 1520755 1523412 + 3.A.3.5.15
pfam A36_contig_250 A36_contig_250_1312 1524367 1524906 + NusG
pfam A36_contig_250 A36_contig_250_1313 1525027 1525317 + NAD_Gly3P_dh_N | TrkA_N | 3HCDH_N | UDPG_MGDP_dh_N | F420_oxidored
CAZyme A36_contig_250 A36_contig_250_1314 1525945 1527213 + GT4
pfam A36_contig_250 A36_contig_250_1315 1527228 1527812 + Hexapep | Hexapep_2
CAZyme A36_contig_250 A36_contig_250_1316 1527812 1528924 + GT4
CAZyme A36_contig_250 A36_contig_250_1317 1529232 1530404 + GT4
Gene ID: A36_contig_250_1311
Type: TC
Location: 1520755 - 1523412 (+)
Gene ID: A36_contig_250_1312
Type: pfam
Location: 1524367 - 1524906 (+)
Gene ID: A36_contig_250_1313
Type: pfam
Location: 1525027 - 1525317 (+)
Gene ID: A36_contig_250_1314
Type: CAZyme
Location: 1525945 - 1527213 (+)
Gene ID: A36_contig_250_1315
Type: pfam
Location: 1527228 - 1527812 (+)
Gene ID: A36_contig_250_1316
Type: CAZyme
Location: 1527812 - 1528924 (+)
Gene ID: A36_contig_250_1317
Type: CAZyme
Location: 1529232 - 1530404 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A36_contig_250_1315 vegetarian > omnivore 1.38264 0.03447

🧭 Explore Read Mapping of CGC

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