Cluster: A36.bin_19_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: A36.bin_19
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A36_contig_250 | A36_contig_250_702 | 807586 | 810213 | + | 4.A.2.1.17 |
| pfam | A36_contig_250 | A36_contig_250_703 | 810600 | 811715 | + | Meth_synt_2 |
| TF | A36_contig_250 | A36_contig_250_704 | 811849 | 812583 | - | GntR |
| TC | A36_contig_250 | A36_contig_250_705 | 812940 | 814955 | + | 4.A.1.2.13 |
| CAZyme | A36_contig_250 | A36_contig_250_706 | 815081 | 816760 | + | GH13_29 |
Gene ID: A36_contig_250_702
Type: TC
Location: 807586 - 810213 (+)
Type: TC
Location: 807586 - 810213 (+)
Gene ID: A36_contig_250_703
Type: pfam
Location: 810600 - 811715 (+)
Type: pfam
Location: 810600 - 811715 (+)
Gene ID: A36_contig_250_704
Type: TF
Location: 811849 - 812583 (-)
Type: TF
Location: 811849 - 812583 (-)
Gene ID: A36_contig_250_705
Type: TC
Location: 812940 - 814955 (+)
Type: TC
Location: 812940 - 814955 (+)
Gene ID: A36_contig_250_706
Type: CAZyme
Location: 815081 - 816760 (+)
Type: CAZyme
Location: 815081 - 816760 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola catenula
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.