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Cluster: A36.bin_19_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A36_contig_250 A36_contig_250_384 436401 437810 + CE4
pfam A36_contig_250 A36_contig_250_385 438022 438765 + CpsB_CapC
pfam A36_contig_250 A36_contig_250_386 438762 439535 + Wzz
TC A36_contig_250 A36_contig_250_387 439535 440332 + 8.A.3.2.3
TC A36_contig_250 A36_contig_250_388 440537 441991 + 9.B.18.1.2
CAZyme A36_contig_250 A36_contig_250_389 442350 443378 + CE4
pfam A36_contig_250 A36_contig_250_390 443527 444726 - UPF0020 | Cons_hypoth95 | PrmA | Methyltransf_15 | Methyltrans_SAM | Methyltransf_25 | Methyltransf_31 | PUA_3
pfam A36_contig_250 A36_contig_250_391 445292 445600 + DUF6110
TC A36_contig_250 A36_contig_250_392 445778 447862 + 3.A.3.32.3
NULL(UNKNOWN) A36_contig_250 A36_contig_250_393 447966 448208 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A36_contig_250 A36_contig_250_394 448183 448689 + Flavin_Reduct
TC A36_contig_250 A36_contig_250_395 448705 450099 + 2.A.66.1.32
TC A36_contig_250 A36_contig_250_396 450263 451195 + 3.A.1.26.7
TC A36_contig_250 A36_contig_250_397 451298 452185 + 3.A.1.26.7
TC A36_contig_250 A36_contig_250_398 452182 452976 + 3.A.1.25.4
pfam A36_contig_250 A36_contig_250_399 453168 454292 + PseudoU_synth_1 | PseudoU_synth_1
TC A36_contig_250 A36_contig_250_400 454348 455757 + 2.A.35.1.1
pfam A36_contig_250 A36_contig_250_401 455894 456322 + Ribosomal_L13
pfam A36_contig_250 A36_contig_250_402 456351 456740 + Ribosomal_S9
TC A36_contig_250 A36_contig_250_403 456935 458401 + 3.A.7.19.1
Gene ID: A36_contig_250_384
Type: CAZyme
Location: 436401 - 437810 (+)
Gene ID: A36_contig_250_385
Type: pfam
Location: 438022 - 438765 (+)
Gene ID: A36_contig_250_386
Type: pfam
Location: 438762 - 439535 (+)
Gene ID: A36_contig_250_387
Type: TC
Location: 439535 - 440332 (+)
Gene ID: A36_contig_250_388
Type: TC
Location: 440537 - 441991 (+)
Gene ID: A36_contig_250_389
Type: CAZyme
Location: 442350 - 443378 (+)
Gene ID: A36_contig_250_390
Type: pfam
Location: 443527 - 444726 (-)
Gene ID: A36_contig_250_391
Type: pfam
Location: 445292 - 445600 (+)
Gene ID: A36_contig_250_392
Type: TC
Location: 445778 - 447862 (+)
Gene ID: A36_contig_250_393
Type:
Location: 447966 - 448208 (+)
Gene ID: A36_contig_250_394
Type: pfam
Location: 448183 - 448689 (+)
Gene ID: A36_contig_250_395
Type: TC
Location: 448705 - 450099 (+)
Gene ID: A36_contig_250_396
Type: TC
Location: 450263 - 451195 (+)
Gene ID: A36_contig_250_397
Type: TC
Location: 451298 - 452185 (+)
Gene ID: A36_contig_250_398
Type: TC
Location: 452182 - 452976 (+)
Gene ID: A36_contig_250_399
Type: pfam
Location: 453168 - 454292 (+)
Gene ID: A36_contig_250_400
Type: TC
Location: 454348 - 455757 (+)
Gene ID: A36_contig_250_401
Type: pfam
Location: 455894 - 456322 (+)
Gene ID: A36_contig_250_402
Type: pfam
Location: 456351 - 456740 (+)
Gene ID: A36_contig_250_403
Type: TC
Location: 456935 - 458401 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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