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Cluster: A36.bin_19_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A36_contig_250 A36_contig_250_338 376139 376801 - 9.B.28.1.2
TF A36_contig_250 A36_contig_250_339 377078 378031 - HTH_1
TC A36_contig_250 A36_contig_250_340 378365 379306 + 3.A.1.5.11
TC A36_contig_250 A36_contig_250_341 379321 380175 + 3.A.1.5.20
TC A36_contig_250 A36_contig_250_342 380177 382207 + 3.A.1.5.26
TC A36_contig_250 A36_contig_250_343 382314 383939 + 3.A.1.5.27
pfam A36_contig_250 A36_contig_250_344 384084 385070 + UxuA
CAZyme A36_contig_250 A36_contig_250_345 385072 386364 + GH28
Gene ID: A36_contig_250_338
Type: TC
Location: 376139 - 376801 (-)
Gene ID: A36_contig_250_339
Type: TF
Location: 377078 - 378031 (-)
Gene ID: A36_contig_250_340
Type: TC
Location: 378365 - 379306 (+)
Gene ID: A36_contig_250_341
Type: TC
Location: 379321 - 380175 (+)
Gene ID: A36_contig_250_342
Type: TC
Location: 380177 - 382207 (+)
Gene ID: A36_contig_250_343
Type: TC
Location: 382314 - 383939 (+)
Gene ID: A36_contig_250_344
Type: pfam
Location: 384084 - 385070 (+)
Gene ID: A36_contig_250_345
Type: CAZyme
Location: 385072 - 386364 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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