Cluster: A36.bin_19_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: A36.bin_19
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A36_contig_250 | A36_contig_250_319 | 353565 | 354551 | + | GT8 |
| pfam | A36_contig_250 | A36_contig_250_320 | 354548 | 355648 | + | Glycos_transf_2 | Glyco_tranf_2_3 |
| CAZyme | A36_contig_250 | A36_contig_250_321 | 355645 | 356529 | + | GT2 |
| STP | A36_contig_250 | A36_contig_250_322 | 356558 | 359839 | + | HATPase_c | HisKA | Response_reg | Response_reg | SBP_bac_3 | SBP_bac_3 |
| peptidase | A36_contig_250 | A36_contig_250_323 | 359976 | 361661 | - | C82.UNA |
| CAZyme | A36_contig_250 | A36_contig_250_324 | 361897 | 362877 | + | GT2 |
| TC | A36_contig_250 | A36_contig_250_325 | 362994 | 364445 | + | 2.A.66.2.6 |
| pfam | A36_contig_250 | A36_contig_250_326 | 364704 | 365774 | + | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATPgrasp_Ter |
| STP | A36_contig_250 | A36_contig_250_327 | 365821 | 366945 | + | Aminotran_1_2 |
| CAZyme | A36_contig_250 | A36_contig_250_328 | 366974 | 367669 | + | GT2 |
| NULL(UNKNOWN) | A36_contig_250 | A36_contig_250_329 | 367697 | 369007 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A36_contig_250 | A36_contig_250_330 | 369004 | 369951 | + | GT2 |
Gene ID: A36_contig_250_319
Type: CAZyme
Location: 353565 - 354551 (+)
Type: CAZyme
Location: 353565 - 354551 (+)
Gene ID: A36_contig_250_320
Type: pfam
Location: 354548 - 355648 (+)
Type: pfam
Location: 354548 - 355648 (+)
Gene ID: A36_contig_250_321
Type: CAZyme
Location: 355645 - 356529 (+)
Type: CAZyme
Location: 355645 - 356529 (+)
Gene ID: A36_contig_250_322
Type: STP
Location: 356558 - 359839 (+)
Type: STP
Location: 356558 - 359839 (+)
Gene ID: A36_contig_250_323
Type: peptidase
Location: 359976 - 361661 (-)
Type: peptidase
Location: 359976 - 361661 (-)
Gene ID: A36_contig_250_324
Type: CAZyme
Location: 361897 - 362877 (+)
Type: CAZyme
Location: 361897 - 362877 (+)
Gene ID: A36_contig_250_325
Type: TC
Location: 362994 - 364445 (+)
Type: TC
Location: 362994 - 364445 (+)
Gene ID: A36_contig_250_326
Type: pfam
Location: 364704 - 365774 (+)
Type: pfam
Location: 364704 - 365774 (+)
Gene ID: A36_contig_250_327
Type: STP
Location: 365821 - 366945 (+)
Type: STP
Location: 365821 - 366945 (+)
Gene ID: A36_contig_250_328
Type: CAZyme
Location: 366974 - 367669 (+)
Type: CAZyme
Location: 366974 - 367669 (+)
Gene ID: A36_contig_250_329
Type:
Location: 367697 - 369007 (+)
Type:
Location: 367697 - 369007 (+)
Gene ID: A36_contig_250_330
Type: CAZyme
Location: 369004 - 369951 (+)
Type: CAZyme
Location: 369004 - 369951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola catenula
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.