dbCAN Logo

Cluster: A34.bin_17_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_635 A34_contig_635_1003 1076155 1077327 + GH109
NULL(UNKNOWN) A34_contig_635 A34_contig_635_1004 1077352 1077723 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) A34_contig_635 A34_contig_635_1005 1077967 1078500 - NULL(UNKNOWN)
[View Structural Homologs]
TC A34_contig_635 A34_contig_635_1006 1078543 1081233 - 1.C.105.2.6
Gene ID: A34_contig_635_1003
Type: CAZyme
Location: 1076155 - 1077327 (+)
Gene ID: A34_contig_635_1004
Type:
Location: 1077352 - 1077723 (+)
Gene ID: A34_contig_635_1005
Type:
Location: 1077967 - 1078500 (-)
Gene ID: A34_contig_635_1006
Type: TC
Location: 1078543 - 1081233 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_635_1003 vegetarian > vegan 1.66033 0.00050

🧭 Explore Read Mapping of CGC

← Back to Cluster List