Cluster: A34.bin_17_CGC8
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: A34.bin_17
- CGC Family ID: CGCFAM_06721
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A34_contig_635 | A34_contig_635_974 | 1034376 | 1035269 | + | 3.A.1.1.34 |
| TC | A34_contig_635 | A34_contig_635_975 | 1035290 | 1036180 | + | 3.A.1.1.39 |
| pfam | A34_contig_635 | A34_contig_635_976 | 1036197 | 1038230 | + | Yip1 |
| CAZyme | A34_contig_635 | A34_contig_635_977 | 1038249 | 1043198 | + | GH31 |
| pfam | A34_contig_635 | A34_contig_635_978 | 1043261 | 1045534 | + | DUF5696 |
| TC | A34_contig_635 | A34_contig_635_979 | 1045531 | 1046409 | + | 3.A.1.1.45 |
| TC | A34_contig_635 | A34_contig_635_980 | 1046409 | 1047341 | + | 3.A.1.1.32 |
| CAZyme | A34_contig_635 | A34_contig_635_981 | 1047358 | 1049628 | + | GH31 |
| CAZyme | A34_contig_635 | A34_contig_635_982 | 1049644 | 1052703 | + | CBM32 | GH31_3 |
| pfam | A34_contig_635 | A34_contig_635_983 | 1052724 | 1053353 | + | Lipase_GDSL | Lipase_GDSL_2 |
| pfam | A34_contig_635 | A34_contig_635_984 | 1053343 | 1054434 | + | Lipase_GDSL_2 |
| CAZyme | A34_contig_635 | A34_contig_635_985 | 1054486 | 1056120 | + | GH3 |
| CAZyme | A34_contig_635 | A34_contig_635_986 | 1056154 | 1058094 | + | GH151 |
| CAZyme | A34_contig_635 | A34_contig_635_987 | 1058113 | 1060410 | + | GH38 |
Gene ID: A34_contig_635_974
Type: TC
Location: 1034376 - 1035269 (+)
Type: TC
Location: 1034376 - 1035269 (+)
Gene ID: A34_contig_635_975
Type: TC
Location: 1035290 - 1036180 (+)
Type: TC
Location: 1035290 - 1036180 (+)
Gene ID: A34_contig_635_976
Type: pfam
Location: 1036197 - 1038230 (+)
Type: pfam
Location: 1036197 - 1038230 (+)
Gene ID: A34_contig_635_977
Type: CAZyme
Location: 1038249 - 1043198 (+)
Type: CAZyme
Location: 1038249 - 1043198 (+)
Gene ID: A34_contig_635_978
Type: pfam
Location: 1043261 - 1045534 (+)
Type: pfam
Location: 1043261 - 1045534 (+)
Gene ID: A34_contig_635_979
Type: TC
Location: 1045531 - 1046409 (+)
Type: TC
Location: 1045531 - 1046409 (+)
Gene ID: A34_contig_635_980
Type: TC
Location: 1046409 - 1047341 (+)
Type: TC
Location: 1046409 - 1047341 (+)
Gene ID: A34_contig_635_981
Type: CAZyme
Location: 1047358 - 1049628 (+)
Type: CAZyme
Location: 1047358 - 1049628 (+)
Gene ID: A34_contig_635_982
Type: CAZyme
Location: 1049644 - 1052703 (+)
Type: CAZyme
Location: 1049644 - 1052703 (+)
Gene ID: A34_contig_635_983
Type: pfam
Location: 1052724 - 1053353 (+)
Type: pfam
Location: 1052724 - 1053353 (+)
Gene ID: A34_contig_635_984
Type: pfam
Location: 1053343 - 1054434 (+)
Type: pfam
Location: 1053343 - 1054434 (+)
Gene ID: A34_contig_635_985
Type: CAZyme
Location: 1054486 - 1056120 (+)
Type: CAZyme
Location: 1054486 - 1056120 (+)
Gene ID: A34_contig_635_986
Type: CAZyme
Location: 1056154 - 1058094 (+)
Type: CAZyme
Location: 1056154 - 1058094 (+)
Gene ID: A34_contig_635_987
Type: CAZyme
Location: 1058113 - 1060410 (+)
Type: CAZyme
Location: 1058113 - 1060410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900549055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A34_contig_635_974 | vegetarian > vegan | 2.91182 | 0.00050 |
| A34_contig_635_975 | vegetarian > vegan | 3.32739 | 0.00050 |
| A34_contig_635_976 | vegetarian > vegan | 1.11934 | 0.00050 |
| A34_contig_635_977 | vegetarian > vegan | 3.10757 | 0.00050 |
| A34_contig_635_978 | vegetarian > vegan | 2.67340 | 0.00050 |
| A34_contig_635_979 | vegetarian > vegan | 2.66717 | 0.00050 |
| A34_contig_635_980 | vegetarian > vegan | 3.08740 | 0.00050 |
| A34_contig_635_981 | vegetarian > vegan | 2.56115 | 0.00050 |
| A34_contig_635_982 | vegetarian > vegan | 1.44099 | 0.00050 |
| A34_contig_635_983 | vegetarian > vegan | 3.06510 | 0.00050 |
| A34_contig_635_984 | vegetarian > vegan | 3.59192 | 0.00050 |
| A34_contig_635_985 | vegetarian > vegan | 1.64256 | 0.00050 |
| A34_contig_635_986 | vegetarian > vegan | 1.76231 | 0.00050 |
| A34_contig_635_987 | vegetarian > vegan | 1.67116 | 0.00050 |