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Cluster: A34.bin_17_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_635 A34_contig_635_625 654239 654907 - 3.A.1.105.12
TC A34_contig_635 A34_contig_635_626 654908 655855 - 3.A.1.15.7
TC A34_contig_635 A34_contig_635_627 656257 657096 - 3.A.1.132.3
pfam A34_contig_635 A34_contig_635_628 657167 657838 - Lactamase_B_2 | Lactamase_B_3
CAZyme A34_contig_635 A34_contig_635_629 658005 659354 - GH10
Gene ID: A34_contig_635_625
Type: TC
Location: 654239 - 654907 (-)
Gene ID: A34_contig_635_626
Type: TC
Location: 654908 - 655855 (-)
Gene ID: A34_contig_635_627
Type: TC
Location: 656257 - 657096 (-)
Gene ID: A34_contig_635_628
Type: pfam
Location: 657167 - 657838 (-)
Gene ID: A34_contig_635_629
Type: CAZyme
Location: 658005 - 659354 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_635_628 vegetarian > vegan 2.10133 0.00050
A34_contig_635_629 vegetarian > vegan 1.93085 0.00050

🧭 Explore Read Mapping of CGC

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