dbCAN Logo

Cluster: A34.bin_17_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_635 A34_contig_635_489 518042 518950 - 3.A.11.1.4
TC A34_contig_635 A34_contig_635_490 518934 521405 - 3.A.12.1.1
peptidase A34_contig_635 A34_contig_635_491 521446 522138 - S14.UPW
CAZyme A34_contig_635 A34_contig_635_492 522242 523363 - GT28
pfam A34_contig_635 A34_contig_635_493 523755 524870 - APH
STP A34_contig_635 A34_contig_635_494 525091 525885 + SBP_bac_3
TC A34_contig_635 A34_contig_635_495 525957 526616 + 3.A.1.3.12
TC A34_contig_635 A34_contig_635_496 526626 527384 + 3.A.1.3.24
Gene ID: A34_contig_635_489
Type: TC
Location: 518042 - 518950 (-)
Gene ID: A34_contig_635_490
Type: TC
Location: 518934 - 521405 (-)
Gene ID: A34_contig_635_491
Type: peptidase
Location: 521446 - 522138 (-)
Gene ID: A34_contig_635_492
Type: CAZyme
Location: 522242 - 523363 (-)
Gene ID: A34_contig_635_493
Type: pfam
Location: 523755 - 524870 (-)
Gene ID: A34_contig_635_494
Type: STP
Location: 525091 - 525885 (+)
Gene ID: A34_contig_635_495
Type: TC
Location: 525957 - 526616 (+)
Gene ID: A34_contig_635_496
Type: TC
Location: 526626 - 527384 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_635_489 vegetarian > vegan 2.39193 0.00050
A34_contig_635_490 vegetarian > vegan 2.32301 0.00050
A34_contig_635_492 vegetarian > vegan 1.65315 0.00050
A34_contig_635_493 vegetarian > vegan 1.81376 0.00050
A34_contig_635_494 vegetarian > vegan 1.86584 0.00050

🧭 Explore Read Mapping of CGC

← Back to Cluster List