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Cluster: A34.bin_17_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_705 A34_contig_705_1705 1924826 1925803 - 3.A.1.1.11
TC A34_contig_705 A34_contig_705_1706 1925818 1926714 - 3.A.1.1.11
pfam A34_contig_705 A34_contig_705_1707 1926711 1928957 - DUF5696
pfam A34_contig_705 A34_contig_705_1708 1928974 1931091 - Yip1
TC A34_contig_705 A34_contig_705_1709 1931110 1932009 - 3.A.1.1.29
TC A34_contig_705 A34_contig_705_1710 1932019 1932936 - 3.A.1.1.11
STP A34_contig_705 A34_contig_705_1711 1932938 1935805 - SBP_bac_1
CAZyme A34_contig_705 A34_contig_705_1712 1935921 1938839 - GH16_3
CAZyme A34_contig_705 A34_contig_705_1713 1938897 1940408 - GH16_3
TF A34_contig_705 A34_contig_705_1714 1940773 1941666 + HTH_AraC | HTH_AraC
CAZyme A34_contig_705 A34_contig_705_1715 1941956 1944136 + GH36
pfam A34_contig_705 A34_contig_705_1716 1944154 1945344 + Metallophos
pfam A34_contig_705 A34_contig_705_1717 1945830 1946732 - ABC2_membrane | ABC2_membrane_3
TC A34_contig_705 A34_contig_705_1718 1946729 1947634 - 3.A.1.105.9
pfam A34_contig_705 A34_contig_705_1719 1947826 1948278 + HSP20 | ArsA_HSP20
NULL(UNKNOWN) A34_contig_705 A34_contig_705_1720 1948328 1948507 - NULL(UNKNOWN)
[View Structural Homologs]
TC A34_contig_705 A34_contig_705_1721 1948614 1950002 - 2.A.66.1.28
TC A34_contig_705 A34_contig_705_1722 1950252 1951055 + 3.A.1.3.27
TC A34_contig_705 A34_contig_705_1723 1951171 1951935 + 3.A.1.3.12
TC A34_contig_705 A34_contig_705_1724 1951925 1952665 + 3.A.1.3.25
Gene ID: A34_contig_705_1705
Type: TC
Location: 1924826 - 1925803 (-)
Gene ID: A34_contig_705_1706
Type: TC
Location: 1925818 - 1926714 (-)
Gene ID: A34_contig_705_1707
Type: pfam
Location: 1926711 - 1928957 (-)
Gene ID: A34_contig_705_1708
Type: pfam
Location: 1928974 - 1931091 (-)
Gene ID: A34_contig_705_1709
Type: TC
Location: 1931110 - 1932009 (-)
Gene ID: A34_contig_705_1710
Type: TC
Location: 1932019 - 1932936 (-)
Gene ID: A34_contig_705_1711
Type: STP
Location: 1932938 - 1935805 (-)
Gene ID: A34_contig_705_1712
Type: CAZyme
Location: 1935921 - 1938839 (-)
Gene ID: A34_contig_705_1713
Type: CAZyme
Location: 1938897 - 1940408 (-)
Gene ID: A34_contig_705_1714
Type: TF
Location: 1940773 - 1941666 (+)
Gene ID: A34_contig_705_1715
Type: CAZyme
Location: 1941956 - 1944136 (+)
Gene ID: A34_contig_705_1716
Type: pfam
Location: 1944154 - 1945344 (+)
Gene ID: A34_contig_705_1717
Type: pfam
Location: 1945830 - 1946732 (-)
Gene ID: A34_contig_705_1718
Type: TC
Location: 1946729 - 1947634 (-)
Gene ID: A34_contig_705_1719
Type: pfam
Location: 1947826 - 1948278 (+)
Gene ID: A34_contig_705_1720
Type:
Location: 1948328 - 1948507 (-)
Gene ID: A34_contig_705_1721
Type: TC
Location: 1948614 - 1950002 (-)
Gene ID: A34_contig_705_1722
Type: TC
Location: 1950252 - 1951055 (+)
Gene ID: A34_contig_705_1723
Type: TC
Location: 1951171 - 1951935 (+)
Gene ID: A34_contig_705_1724
Type: TC
Location: 1951925 - 1952665 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_1705 vegetarian > vegan 2.73502 0.00050
A34_contig_705_1706 vegetarian > vegan 1.63071 0.00050
A34_contig_705_1707 vegetarian > vegan 1.18105 0.00050
A34_contig_705_1710 vegetarian > vegan 2.41146 0.00050
A34_contig_705_1711 vegetarian > vegan 1.42644 0.00050
A34_contig_705_1713 vegetarian > vegan 2.29305 0.00050
A34_contig_705_1714 vegetarian > vegan 1.41408 0.00050
A34_contig_705_1715 vegetarian > vegan 3.47805 0.00050
A34_contig_705_1716 vegetarian > vegan 2.13655 0.00050
A34_contig_705_1718 vegetarian > vegan 2.01548 0.00050
A34_contig_705_1720 vegetarian > vegan 2.09333 0.00050
A34_contig_705_1722 vegetarian > vegan 1.22697 0.00050
A34_contig_705_1723 vegetarian > vegan 2.28991 0.00050

🧭 Explore Read Mapping of CGC

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