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Cluster: A34.bin_17_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_705 A34_contig_705_1688 1897016 1898581 + GH20
CAZyme A34_contig_705 A34_contig_705_1689 1898600 1899547 + GH179
STP A34_contig_705 A34_contig_705_1690 1899640 1901124 - Pyr_redox_2
STP A34_contig_705 A34_contig_705_1691 1901140 1905660 - GATase_2
TC A34_contig_705 A34_contig_705_1692 1905785 1906735 - 8.A.21.2.2
Gene ID: A34_contig_705_1688
Type: CAZyme
Location: 1897016 - 1898581 (+)
Gene ID: A34_contig_705_1689
Type: CAZyme
Location: 1898600 - 1899547 (+)
Gene ID: A34_contig_705_1690
Type: STP
Location: 1899640 - 1901124 (-)
Gene ID: A34_contig_705_1691
Type: STP
Location: 1901140 - 1905660 (-)
Gene ID: A34_contig_705_1692
Type: TC
Location: 1905785 - 1906735 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_1688 vegetarian > vegan 1.59903 0.00050

🧭 Explore Read Mapping of CGC

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