Cluster: A34.bin_17_CGC35
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: A34.bin_17
- CGC Family ID: CGCFAM_02969
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A34_contig_705 | A34_contig_705_1534 | 1720558 | 1721835 | - | GH109 |
| CAZyme | A34_contig_705 | A34_contig_705_1535 | 1721847 | 1723424 | - | GH36 |
| CAZyme | A34_contig_705 | A34_contig_705_1536 | 1723424 | 1724914 | - | GH78 |
| NULL(UNKNOWN) | A34_contig_705 | A34_contig_705_1537 | 1724974 | 1727361 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A34_contig_705 | A34_contig_705_1538 | 1727697 | 1731302 | - | Dockerin_1 | CBM_4_9 | Y_phosphatase2 | Y_phosphatase3 |
| TC | A34_contig_705 | A34_contig_705_1539 | 1731600 | 1732466 | - | 3.A.1.1.18 |
| pfam | A34_contig_705 | A34_contig_705_1540 | 1732459 | 1733397 | - | BPD_transp_1 |
| STP | A34_contig_705 | A34_contig_705_1541 | 1733430 | 1734923 | - | SBP_bac_1 |
| CAZyme | A34_contig_705 | A34_contig_705_1542 | 1734990 | 1743341 | - | CBM67 |
| TC | A34_contig_705 | A34_contig_705_1543 | 1743503 | 1745326 | + | 8.A.59.2.1 |
Gene ID: A34_contig_705_1534
Type: CAZyme
Location: 1720558 - 1721835 (-)
Type: CAZyme
Location: 1720558 - 1721835 (-)
Gene ID: A34_contig_705_1535
Type: CAZyme
Location: 1721847 - 1723424 (-)
Type: CAZyme
Location: 1721847 - 1723424 (-)
Gene ID: A34_contig_705_1536
Type: CAZyme
Location: 1723424 - 1724914 (-)
Type: CAZyme
Location: 1723424 - 1724914 (-)
Gene ID: A34_contig_705_1537
Type:
Location: 1724974 - 1727361 (-)
Type:
Location: 1724974 - 1727361 (-)
Gene ID: A34_contig_705_1538
Type: pfam
Location: 1727697 - 1731302 (-)
Type: pfam
Location: 1727697 - 1731302 (-)
Gene ID: A34_contig_705_1539
Type: TC
Location: 1731600 - 1732466 (-)
Type: TC
Location: 1731600 - 1732466 (-)
Gene ID: A34_contig_705_1540
Type: pfam
Location: 1732459 - 1733397 (-)
Type: pfam
Location: 1732459 - 1733397 (-)
Gene ID: A34_contig_705_1541
Type: STP
Location: 1733430 - 1734923 (-)
Type: STP
Location: 1733430 - 1734923 (-)
Gene ID: A34_contig_705_1542
Type: CAZyme
Location: 1734990 - 1743341 (-)
Type: CAZyme
Location: 1734990 - 1743341 (-)
Gene ID: A34_contig_705_1543
Type: TC
Location: 1743503 - 1745326 (+)
Type: TC
Location: 1743503 - 1745326 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900549055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A34_contig_705_1534 | vegetarian > vegan | 3.02504 | 0.00050 |
| A34_contig_705_1535 | vegetarian > vegan | 2.65312 | 0.00050 |
| A34_contig_705_1536 | vegetarian > vegan | 1.22255 | 0.00050 |
| A34_contig_705_1538 | vegetarian > vegan | 2.12682 | 0.00050 |
| A34_contig_705_1539 | vegetarian > vegan | 3.24698 | 0.00050 |
| A34_contig_705_1540 | vegetarian > vegan | 3.63732 | 0.00050 |
| A34_contig_705_1541 | vegetarian > vegan | 4.15340 | 0.00050 |
| A34_contig_705_1542 | vegetarian > vegan | 2.45531 | 0.00050 |
| A34_contig_705_1543 | vegetarian > vegan | 2.17104 | 0.00050 |