Cluster: A34.bin_17_CGC33
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: A34.bin_17
- CGC Family ID: CGCFAM_04370
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A34_contig_705 | A34_contig_705_1471 | 1638497 | 1640353 | - | 9.B.18.2.1 |
| pfam | A34_contig_705 | A34_contig_705_1472 | 1640370 | 1641359 | - | AsnA |
| pfam | A34_contig_705 | A34_contig_705_1473 | 1641378 | 1642754 | - | tRNA-synt_2 | tRNA_anti-codon |
| CAZyme | A34_contig_705 | A34_contig_705_1474 | 1643174 | 1644817 | - | GH78 |
| sulfatase | A34_contig_705 | A34_contig_705_1475 | 1644836 | 1646743 | - | S1_4 |
| pfam | A34_contig_705 | A34_contig_705_1476 | 1646778 | 1652255 | - | Flg_new |
| CAZyme | A34_contig_705 | A34_contig_705_1477 | 1652311 | 1653486 | - | GH16_3 |
| pfam | A34_contig_705 | A34_contig_705_1478 | 1653561 | 1656479 | - | Dockerin_1 |
| STP | A34_contig_705 | A34_contig_705_1479 | 1656577 | 1657902 | - | SBP_bac_1 |
| TC | A34_contig_705 | A34_contig_705_1480 | 1657936 | 1658925 | - | 3.A.1.1.11 |
| TC | A34_contig_705 | A34_contig_705_1481 | 1658939 | 1659832 | - | 3.A.1.1.20 |
| pfam | A34_contig_705 | A34_contig_705_1482 | 1659819 | 1662071 | - | DUF5696 |
| pfam | A34_contig_705 | A34_contig_705_1483 | 1662087 | 1664204 | - | Yip1 |
| TC | A34_contig_705 | A34_contig_705_1484 | 1664216 | 1665112 | - | 3.A.1.1.41 |
| TC | A34_contig_705 | A34_contig_705_1485 | 1665118 | 1666032 | - | 3.A.1.1.11 |
| STP | A34_contig_705 | A34_contig_705_1486 | 1666049 | 1668877 | - | SBP_bac_1 |
| CAZyme | A34_contig_705 | A34_contig_705_1487 | 1668902 | 1669924 | - | GH16_3 |
Gene ID: A34_contig_705_1471
Type: TC
Location: 1638497 - 1640353 (-)
Type: TC
Location: 1638497 - 1640353 (-)
Gene ID: A34_contig_705_1472
Type: pfam
Location: 1640370 - 1641359 (-)
Type: pfam
Location: 1640370 - 1641359 (-)
Gene ID: A34_contig_705_1473
Type: pfam
Location: 1641378 - 1642754 (-)
Type: pfam
Location: 1641378 - 1642754 (-)
Gene ID: A34_contig_705_1474
Type: CAZyme
Location: 1643174 - 1644817 (-)
Type: CAZyme
Location: 1643174 - 1644817 (-)
Gene ID: A34_contig_705_1475
Type: sulfatase
Location: 1644836 - 1646743 (-)
Type: sulfatase
Location: 1644836 - 1646743 (-)
Gene ID: A34_contig_705_1476
Type: pfam
Location: 1646778 - 1652255 (-)
Type: pfam
Location: 1646778 - 1652255 (-)
Gene ID: A34_contig_705_1477
Type: CAZyme
Location: 1652311 - 1653486 (-)
Type: CAZyme
Location: 1652311 - 1653486 (-)
Gene ID: A34_contig_705_1478
Type: pfam
Location: 1653561 - 1656479 (-)
Type: pfam
Location: 1653561 - 1656479 (-)
Gene ID: A34_contig_705_1479
Type: STP
Location: 1656577 - 1657902 (-)
Type: STP
Location: 1656577 - 1657902 (-)
Gene ID: A34_contig_705_1480
Type: TC
Location: 1657936 - 1658925 (-)
Type: TC
Location: 1657936 - 1658925 (-)
Gene ID: A34_contig_705_1481
Type: TC
Location: 1658939 - 1659832 (-)
Type: TC
Location: 1658939 - 1659832 (-)
Gene ID: A34_contig_705_1482
Type: pfam
Location: 1659819 - 1662071 (-)
Type: pfam
Location: 1659819 - 1662071 (-)
Gene ID: A34_contig_705_1483
Type: pfam
Location: 1662087 - 1664204 (-)
Type: pfam
Location: 1662087 - 1664204 (-)
Gene ID: A34_contig_705_1484
Type: TC
Location: 1664216 - 1665112 (-)
Type: TC
Location: 1664216 - 1665112 (-)
Gene ID: A34_contig_705_1485
Type: TC
Location: 1665118 - 1666032 (-)
Type: TC
Location: 1665118 - 1666032 (-)
Gene ID: A34_contig_705_1486
Type: STP
Location: 1666049 - 1668877 (-)
Type: STP
Location: 1666049 - 1668877 (-)
Gene ID: A34_contig_705_1487
Type: CAZyme
Location: 1668902 - 1669924 (-)
Type: CAZyme
Location: 1668902 - 1669924 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900549055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A34_contig_705_1476 | vegetarian > vegan | 6.12107 | 0.00050 |
| A34_contig_705_1477 | vegetarian > vegan | 2.25938 | 0.00050 |
| A34_contig_705_1478 | vegetarian > vegan | 1.11345 | 0.00050 |
| A34_contig_705_1479 | vegetarian > vegan | 3.63239 | 0.00050 |
| A34_contig_705_1484 | vegetarian > vegan | 3.53614 | 0.00050 |
| A34_contig_705_1487 | vegetarian > vegan | 1.15475 | 0.00050 |