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Cluster: A34.bin_17_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_635 A34_contig_635_428 444388 445311 + 3.A.1.1.11
TC A34_contig_635 A34_contig_635_429 445327 446280 + 3.A.1.1.36
CAZyme A34_contig_635 A34_contig_635_430 446316 448712 + GH78
STP A34_contig_635 A34_contig_635_431 448810 451701 + SBP_bac_1
TC A34_contig_635 A34_contig_635_432 451828 452748 + 3.A.1.1.4
TC A34_contig_635 A34_contig_635_433 452751 453641 + 3.A.1.1.39
pfam A34_contig_635 A34_contig_635_434 453674 454903 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TF A34_contig_635 A34_contig_635_435 455218 456033 - HTH_AraC | HTH_AraC
CAZyme A34_contig_635 A34_contig_635_436 456360 459575 - CBM32 | CBM32 | CBM32 | CBM32
CAZyme A34_contig_635 A34_contig_635_437 459885 461927 + GH140
CAZyme A34_contig_635 A34_contig_635_438 462027 464537 + GH140
Gene ID: A34_contig_635_428
Type: TC
Location: 444388 - 445311 (+)
Gene ID: A34_contig_635_429
Type: TC
Location: 445327 - 446280 (+)
Gene ID: A34_contig_635_430
Type: CAZyme
Location: 446316 - 448712 (+)
Gene ID: A34_contig_635_431
Type: STP
Location: 448810 - 451701 (+)
Gene ID: A34_contig_635_432
Type: TC
Location: 451828 - 452748 (+)
Gene ID: A34_contig_635_433
Type: TC
Location: 452751 - 453641 (+)
Gene ID: A34_contig_635_434
Type: pfam
Location: 453674 - 454903 (+)
Gene ID: A34_contig_635_435
Type: TF
Location: 455218 - 456033 (-)
Gene ID: A34_contig_635_436
Type: CAZyme
Location: 456360 - 459575 (-)
Gene ID: A34_contig_635_437
Type: CAZyme
Location: 459885 - 461927 (+)
Gene ID: A34_contig_635_438
Type: CAZyme
Location: 462027 - 464537 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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