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Cluster: A34.bin_17_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_705 A34_contig_705_1017 1151288 1152349 + CE9
pfam A34_contig_705 A34_contig_705_1018 1152349 1152813 + tRNA_edit
pfam A34_contig_705 A34_contig_705_1019 1152924 1154069 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC A34_contig_705 A34_contig_705_1020 1154418 1155053 - 9.B.31.1.1
Gene ID: A34_contig_705_1017
Type: CAZyme
Location: 1151288 - 1152349 (+)
Gene ID: A34_contig_705_1018
Type: pfam
Location: 1152349 - 1152813 (+)
Gene ID: A34_contig_705_1019
Type: pfam
Location: 1152924 - 1154069 (+)
Gene ID: A34_contig_705_1020
Type: TC
Location: 1154418 - 1155053 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_1017 vegetarian > vegan 1.20891 0.00050

🧭 Explore Read Mapping of CGC

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