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Cluster: A34.bin_17_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_705 A34_contig_705_885 1022154 1023320 + 2.A.103.1.2
pfam A34_contig_705 A34_contig_705_886 1023425 1024132 + ThuA
CAZyme A34_contig_705 A34_contig_705_887 1024141 1025187 + GH179
pfam A34_contig_705 A34_contig_705_888 1025187 1026185 + GFO_IDH_MocA | GFO_IDH_MocA_C3
pfam A34_contig_705 A34_contig_705_889 1026182 1027096 + AP_endonuc_2
CAZyme A34_contig_705 A34_contig_705_890 1027403 1028557 + GH179
Gene ID: A34_contig_705_885
Type: TC
Location: 1022154 - 1023320 (+)
Gene ID: A34_contig_705_886
Type: pfam
Location: 1023425 - 1024132 (+)
Gene ID: A34_contig_705_887
Type: CAZyme
Location: 1024141 - 1025187 (+)
Gene ID: A34_contig_705_888
Type: pfam
Location: 1025187 - 1026185 (+)
Gene ID: A34_contig_705_889
Type: pfam
Location: 1026182 - 1027096 (+)
Gene ID: A34_contig_705_890
Type: CAZyme
Location: 1027403 - 1028557 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_886 vegetarian > vegan 1.80093 0.00050
A34_contig_705_887 vegetarian > vegan 2.41830 0.00050
A34_contig_705_888 vegetarian > vegan 2.08928 0.00050
A34_contig_705_890 vegetarian > vegan 1.55308 0.00050

🧭 Explore Read Mapping of CGC

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