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Cluster: A34.bin_17_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_705 A34_contig_705_680 782278 783189 + 3.A.1.1.20
TC A34_contig_705 A34_contig_705_681 783229 784089 + 3.A.1.1.39
pfam A34_contig_705 A34_contig_705_682 784086 786197 + NHL | NHL | Yip1
pfam A34_contig_705 A34_contig_705_683 786274 788829 + DUF5696
TC A34_contig_705 A34_contig_705_684 788826 789725 + 3.A.1.1.25
TC A34_contig_705 A34_contig_705_685 789763 790701 + 3.A.1.1.11
pfam A34_contig_705 A34_contig_705_686 790721 795874 + Flg_new | Flg_new | Flg_new | Flg_new | Flg_new | Flg_new
CAZyme A34_contig_705 A34_contig_705_687 795874 797121 + GH5_25
CAZyme A34_contig_705 A34_contig_705_688 797169 801587 + GH5_25
CAZyme A34_contig_705 A34_contig_705_689 801614 803284 + GH123
Gene ID: A34_contig_705_680
Type: TC
Location: 782278 - 783189 (+)
Gene ID: A34_contig_705_681
Type: TC
Location: 783229 - 784089 (+)
Gene ID: A34_contig_705_682
Type: pfam
Location: 784086 - 786197 (+)
Gene ID: A34_contig_705_683
Type: pfam
Location: 786274 - 788829 (+)
Gene ID: A34_contig_705_684
Type: TC
Location: 788826 - 789725 (+)
Gene ID: A34_contig_705_685
Type: TC
Location: 789763 - 790701 (+)
Gene ID: A34_contig_705_686
Type: pfam
Location: 790721 - 795874 (+)
Gene ID: A34_contig_705_687
Type: CAZyme
Location: 795874 - 797121 (+)
Gene ID: A34_contig_705_688
Type: CAZyme
Location: 797169 - 801587 (+)
Gene ID: A34_contig_705_689
Type: CAZyme
Location: 801614 - 803284 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_685 vegetarian > vegan 1.84711 0.00050

🧭 Explore Read Mapping of CGC

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