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Cluster: A34.bin_17_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_635 A34_contig_635_346 366945 367649 + 3.A.1.147.6
NULL(UNKNOWN) A34_contig_635 A34_contig_635_347 367652 369244 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A34_contig_635 A34_contig_635_348 369367 370857 - GH77
TC A34_contig_635 A34_contig_635_349 370841 371671 - 3.A.1.1.45
TC A34_contig_635 A34_contig_635_350 371672 372517 - 3.A.1.1.45
TC A34_contig_635 A34_contig_635_351 372518 373855 - 3.A.1.1.45
Gene ID: A34_contig_635_346
Type: TC
Location: 366945 - 367649 (+)
Gene ID: A34_contig_635_347
Type:
Location: 367652 - 369244 (+)
Gene ID: A34_contig_635_348
Type: CAZyme
Location: 369367 - 370857 (-)
Gene ID: A34_contig_635_349
Type: TC
Location: 370841 - 371671 (-)
Gene ID: A34_contig_635_350
Type: TC
Location: 371672 - 372517 (-)
Gene ID: A34_contig_635_351
Type: TC
Location: 372518 - 373855 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_635_346 vegetarian > vegan 1.47107 0.00050
A34_contig_635_347 vegetarian > vegan 1.86732 0.00050
A34_contig_635_348 vegetarian > vegan 2.00919 0.00050
A34_contig_635_349 vegetarian > vegan 1.08738 0.00050
A34_contig_635_350 vegetarian > vegan 2.39555 0.00050
A34_contig_635_351 vegetarian > vegan 1.28474 0.00050

🧭 Explore Read Mapping of CGC

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