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Cluster: A34.bin_17_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A34_contig_705 A34_contig_705_557 648382 650061 + 3.A.1.32.2
pfam A34_contig_705 A34_contig_705_558 650058 650732 + ECF-ribofla_trS | ECF_trnsprt
pfam A34_contig_705 A34_contig_705_559 651019 652050 - DUF3048 | DUF3048_C
TC A34_contig_705 A34_contig_705_560 652181 654814 - 3.A.1.122.13
CAZyme A34_contig_705 A34_contig_705_561 654918 657176 + GT51
Gene ID: A34_contig_705_557
Type: TC
Location: 648382 - 650061 (+)
Gene ID: A34_contig_705_558
Type: pfam
Location: 650058 - 650732 (+)
Gene ID: A34_contig_705_559
Type: pfam
Location: 651019 - 652050 (-)
Gene ID: A34_contig_705_560
Type: TC
Location: 652181 - 654814 (-)
Gene ID: A34_contig_705_561
Type: CAZyme
Location: 654918 - 657176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_559 vegetarian > vegan 1.82910 0.00050
A34_contig_705_561 vegetarian > vegan 2.50857 0.00050

🧭 Explore Read Mapping of CGC

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