Cluster: A34.bin_17_CGC18
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: A34.bin_17
- CGC Family ID: CGCFAM_03083
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A34_contig_705 | A34_contig_705_516 | 592822 | 597339 | + | GH16_3 |
| CAZyme | A34_contig_705 | A34_contig_705_517 | 597379 | 598287 | + | GH16_3 |
| CAZyme | A34_contig_705 | A34_contig_705_518 | 598287 | 599870 | + | GH3 |
| STP | A34_contig_705 | A34_contig_705_519 | 599904 | 602633 | + | SBP_bac_1 |
| TC | A34_contig_705 | A34_contig_705_520 | 602639 | 603550 | + | 3.A.1.1.11 |
| TC | A34_contig_705 | A34_contig_705_521 | 603556 | 604455 | + | 3.A.1.1.11 |
| pfam | A34_contig_705 | A34_contig_705_522 | 604467 | 606614 | + | Yip1 |
| pfam | A34_contig_705 | A34_contig_705_523 | 606646 | 608865 | + | DUF5696 |
| TC | A34_contig_705 | A34_contig_705_524 | 608865 | 609758 | + | 3.A.1.1.11 |
| TC | A34_contig_705 | A34_contig_705_525 | 609764 | 610735 | + | 3.A.1.1.20 |
| pfam | A34_contig_705 | A34_contig_705_526 | 610760 | 612193 | + | SBP_bac_8 |
| pfam | A34_contig_705 | A34_contig_705_527 | 612221 | 616273 | + | Flg_new | Flg_new | Flg_new |
| CAZyme | A34_contig_705 | A34_contig_705_528 | 616270 | 618732 | + | GH16 |
| TF | A34_contig_705 | A34_contig_705_529 | 618775 | 619956 | + | HTH_3 |
| STP | A34_contig_705 | A34_contig_705_530 | 619949 | 620758 | + | SIS |
| CAZyme | A34_contig_705 | A34_contig_705_531 | 620742 | 622499 | + | GH163 |
Gene ID: A34_contig_705_516
Type: CAZyme
Location: 592822 - 597339 (+)
Type: CAZyme
Location: 592822 - 597339 (+)
Gene ID: A34_contig_705_517
Type: CAZyme
Location: 597379 - 598287 (+)
Type: CAZyme
Location: 597379 - 598287 (+)
Gene ID: A34_contig_705_518
Type: CAZyme
Location: 598287 - 599870 (+)
Type: CAZyme
Location: 598287 - 599870 (+)
Gene ID: A34_contig_705_519
Type: STP
Location: 599904 - 602633 (+)
Type: STP
Location: 599904 - 602633 (+)
Gene ID: A34_contig_705_520
Type: TC
Location: 602639 - 603550 (+)
Type: TC
Location: 602639 - 603550 (+)
Gene ID: A34_contig_705_521
Type: TC
Location: 603556 - 604455 (+)
Type: TC
Location: 603556 - 604455 (+)
Gene ID: A34_contig_705_522
Type: pfam
Location: 604467 - 606614 (+)
Type: pfam
Location: 604467 - 606614 (+)
Gene ID: A34_contig_705_523
Type: pfam
Location: 606646 - 608865 (+)
Type: pfam
Location: 606646 - 608865 (+)
Gene ID: A34_contig_705_524
Type: TC
Location: 608865 - 609758 (+)
Type: TC
Location: 608865 - 609758 (+)
Gene ID: A34_contig_705_525
Type: TC
Location: 609764 - 610735 (+)
Type: TC
Location: 609764 - 610735 (+)
Gene ID: A34_contig_705_526
Type: pfam
Location: 610760 - 612193 (+)
Type: pfam
Location: 610760 - 612193 (+)
Gene ID: A34_contig_705_527
Type: pfam
Location: 612221 - 616273 (+)
Type: pfam
Location: 612221 - 616273 (+)
Gene ID: A34_contig_705_528
Type: CAZyme
Location: 616270 - 618732 (+)
Type: CAZyme
Location: 616270 - 618732 (+)
Gene ID: A34_contig_705_529
Type: TF
Location: 618775 - 619956 (+)
Type: TF
Location: 618775 - 619956 (+)
Gene ID: A34_contig_705_530
Type: STP
Location: 619949 - 620758 (+)
Type: STP
Location: 619949 - 620758 (+)
Gene ID: A34_contig_705_531
Type: CAZyme
Location: 620742 - 622499 (+)
Type: CAZyme
Location: 620742 - 622499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900549055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.