Cluster: A34.bin_17_CGC17
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: A34.bin_17
- CGC Family ID: CGCFAM_03081
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A34_contig_705 | A34_contig_705_468 | 532200 | 533114 | + | GH16_3 |
| STP | A34_contig_705 | A34_contig_705_469 | 533185 | 534543 | + | SBP_bac_1 |
| pfam | A34_contig_705 | A34_contig_705_470 | 534578 | 539695 | + | CBM_4_9 | Flg_new | Flg_new | Flg_new |
| CAZyme | A34_contig_705 | A34_contig_705_471 | 539702 | 541486 | + | GH16_3 |
| CAZyme | A34_contig_705 | A34_contig_705_472 | 541616 | 545026 | + | GH16_3 |
| pfam | A34_contig_705 | A34_contig_705_473 | 545048 | 545347 | + | Dockerin_1 |
| STP | A34_contig_705 | A34_contig_705_474 | 545489 | 548368 | + | SBP_bac_1 |
| TC | A34_contig_705 | A34_contig_705_475 | 548365 | 549291 | + | 3.A.1.1.36 |
| TC | A34_contig_705 | A34_contig_705_476 | 549304 | 550227 | + | 3.A.1.1.20 |
| pfam | A34_contig_705 | A34_contig_705_477 | 550246 | 552354 | + | Yip1 |
| pfam | A34_contig_705 | A34_contig_705_478 | 552367 | 554571 | + | DUF5696 |
| TC | A34_contig_705 | A34_contig_705_479 | 554568 | 555464 | + | 3.A.1.1.25 |
| TC | A34_contig_705 | A34_contig_705_480 | 555480 | 556424 | + | 3.A.1.1.11 |
| CAZyme | A34_contig_705 | A34_contig_705_481 | 556457 | 558610 | + | GH35 |
| CAZyme | A34_contig_705 | A34_contig_705_482 | 559003 | 560019 | + | GH30_1 |
| CAZyme | A34_contig_705 | A34_contig_705_483 | 560315 | 562633 | + | GH2 |
Gene ID: A34_contig_705_468
Type: CAZyme
Location: 532200 - 533114 (+)
Type: CAZyme
Location: 532200 - 533114 (+)
Gene ID: A34_contig_705_469
Type: STP
Location: 533185 - 534543 (+)
Type: STP
Location: 533185 - 534543 (+)
Gene ID: A34_contig_705_470
Type: pfam
Location: 534578 - 539695 (+)
Type: pfam
Location: 534578 - 539695 (+)
Gene ID: A34_contig_705_471
Type: CAZyme
Location: 539702 - 541486 (+)
Type: CAZyme
Location: 539702 - 541486 (+)
Gene ID: A34_contig_705_472
Type: CAZyme
Location: 541616 - 545026 (+)
Type: CAZyme
Location: 541616 - 545026 (+)
Gene ID: A34_contig_705_473
Type: pfam
Location: 545048 - 545347 (+)
Type: pfam
Location: 545048 - 545347 (+)
Gene ID: A34_contig_705_474
Type: STP
Location: 545489 - 548368 (+)
Type: STP
Location: 545489 - 548368 (+)
Gene ID: A34_contig_705_475
Type: TC
Location: 548365 - 549291 (+)
Type: TC
Location: 548365 - 549291 (+)
Gene ID: A34_contig_705_476
Type: TC
Location: 549304 - 550227 (+)
Type: TC
Location: 549304 - 550227 (+)
Gene ID: A34_contig_705_477
Type: pfam
Location: 550246 - 552354 (+)
Type: pfam
Location: 550246 - 552354 (+)
Gene ID: A34_contig_705_478
Type: pfam
Location: 552367 - 554571 (+)
Type: pfam
Location: 552367 - 554571 (+)
Gene ID: A34_contig_705_479
Type: TC
Location: 554568 - 555464 (+)
Type: TC
Location: 554568 - 555464 (+)
Gene ID: A34_contig_705_480
Type: TC
Location: 555480 - 556424 (+)
Type: TC
Location: 555480 - 556424 (+)
Gene ID: A34_contig_705_481
Type: CAZyme
Location: 556457 - 558610 (+)
Type: CAZyme
Location: 556457 - 558610 (+)
Gene ID: A34_contig_705_482
Type: CAZyme
Location: 559003 - 560019 (+)
Type: CAZyme
Location: 559003 - 560019 (+)
Gene ID: A34_contig_705_483
Type: CAZyme
Location: 560315 - 562633 (+)
Type: CAZyme
Location: 560315 - 562633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900549055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.