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Cluster: A34.bin_17_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_705 A34_contig_705_211 251222 253552 + GH2
CAZyme A34_contig_705 A34_contig_705_212 253601 254953 + GH30_3
TF A34_contig_705 A34_contig_705_213 255129 255926 - HTH_AraC
STP A34_contig_705 A34_contig_705_214 256209 258989 + SBP_bac_1
TC A34_contig_705 A34_contig_705_215 258995 259894 + 3.A.1.1.36
TC A34_contig_705 A34_contig_705_216 259900 260778 + 3.A.1.1.36
pfam A34_contig_705 A34_contig_705_217 260790 262928 + Yip1
pfam A34_contig_705 A34_contig_705_218 262942 265179 + DUF5696
TC A34_contig_705 A34_contig_705_219 265169 266089 + 3.A.1.1.20
TC A34_contig_705 A34_contig_705_220 266094 267038 + 3.A.1.1.11
Gene ID: A34_contig_705_211
Type: CAZyme
Location: 251222 - 253552 (+)
Gene ID: A34_contig_705_212
Type: CAZyme
Location: 253601 - 254953 (+)
Gene ID: A34_contig_705_213
Type: TF
Location: 255129 - 255926 (-)
Gene ID: A34_contig_705_214
Type: STP
Location: 256209 - 258989 (+)
Gene ID: A34_contig_705_215
Type: TC
Location: 258995 - 259894 (+)
Gene ID: A34_contig_705_216
Type: TC
Location: 259900 - 260778 (+)
Gene ID: A34_contig_705_217
Type: pfam
Location: 260790 - 262928 (+)
Gene ID: A34_contig_705_218
Type: pfam
Location: 262942 - 265179 (+)
Gene ID: A34_contig_705_219
Type: TC
Location: 265169 - 266089 (+)
Gene ID: A34_contig_705_220
Type: TC
Location: 266094 - 267038 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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