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Cluster: A34.bin_17_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_705 A34_contig_705_145 172740 175052 + GH129
TC A34_contig_705 A34_contig_705_146 175049 176689 + 3.A.1.1.9
STP A34_contig_705 A34_contig_705_147 176738 179641 + SBP_bac_1
TC A34_contig_705 A34_contig_705_148 179645 180532 + 3.A.1.1.11
TC A34_contig_705 A34_contig_705_149 180546 181442 + 3.A.1.1.39
pfam A34_contig_705 A34_contig_705_150 181471 183594 + Yip1
pfam A34_contig_705 A34_contig_705_151 183636 185819 + DUF5696
TC A34_contig_705 A34_contig_705_152 185816 186712 + 3.A.1.1.11
TC A34_contig_705 A34_contig_705_153 186715 187647 + 3.A.1.1.11
Gene ID: A34_contig_705_145
Type: CAZyme
Location: 172740 - 175052 (+)
Gene ID: A34_contig_705_146
Type: TC
Location: 175049 - 176689 (+)
Gene ID: A34_contig_705_147
Type: STP
Location: 176738 - 179641 (+)
Gene ID: A34_contig_705_148
Type: TC
Location: 179645 - 180532 (+)
Gene ID: A34_contig_705_149
Type: TC
Location: 180546 - 181442 (+)
Gene ID: A34_contig_705_150
Type: pfam
Location: 181471 - 183594 (+)
Gene ID: A34_contig_705_151
Type: pfam
Location: 183636 - 185819 (+)
Gene ID: A34_contig_705_152
Type: TC
Location: 185816 - 186712 (+)
Gene ID: A34_contig_705_153
Type: TC
Location: 186715 - 187647 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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