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Cluster: A34.bin_17_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_705 A34_contig_705_102 111968 114616 + GH16_3
STP A34_contig_705 A34_contig_705_103 114642 117452 + SBP_bac_1
TC A34_contig_705 A34_contig_705_104 117456 118358 + 3.A.1.1.11
TC A34_contig_705 A34_contig_705_105 118358 119260 + 3.A.1.1.6
pfam A34_contig_705 A34_contig_705_106 119265 121382 + Yip1
pfam A34_contig_705 A34_contig_705_107 121399 123639 + DUF5696
TC A34_contig_705 A34_contig_705_108 123639 124532 + 3.A.1.1.20
TC A34_contig_705 A34_contig_705_109 124533 125438 + 3.A.1.1.41
pfam A34_contig_705 A34_contig_705_110 125532 127202 + Flg_new | Flg_new
TF A34_contig_705 A34_contig_705_111 127369 128550 + GerE
CAZyme A34_contig_705 A34_contig_705_112 128562 130808 + GH3
STP A34_contig_705 A34_contig_705_113 130977 132920 - EAL | GGDEF
NULL(UNKNOWN) A34_contig_705 A34_contig_705_114 132913 133299 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A34_contig_705 A34_contig_705_115 133314 134717 - GT2
Gene ID: A34_contig_705_102
Type: CAZyme
Location: 111968 - 114616 (+)
Gene ID: A34_contig_705_103
Type: STP
Location: 114642 - 117452 (+)
Gene ID: A34_contig_705_104
Type: TC
Location: 117456 - 118358 (+)
Gene ID: A34_contig_705_105
Type: TC
Location: 118358 - 119260 (+)
Gene ID: A34_contig_705_106
Type: pfam
Location: 119265 - 121382 (+)
Gene ID: A34_contig_705_107
Type: pfam
Location: 121399 - 123639 (+)
Gene ID: A34_contig_705_108
Type: TC
Location: 123639 - 124532 (+)
Gene ID: A34_contig_705_109
Type: TC
Location: 124533 - 125438 (+)
Gene ID: A34_contig_705_110
Type: pfam
Location: 125532 - 127202 (+)
Gene ID: A34_contig_705_111
Type: TF
Location: 127369 - 128550 (+)
Gene ID: A34_contig_705_112
Type: CAZyme
Location: 128562 - 130808 (+)
Gene ID: A34_contig_705_113
Type: STP
Location: 130977 - 132920 (-)
Gene ID: A34_contig_705_114
Type:
Location: 132913 - 133299 (-)
Gene ID: A34_contig_705_115
Type: CAZyme
Location: 133314 - 134717 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_102 vegetarian > vegan 1.16241 0.00050
A34_contig_705_107 vegetarian > vegan 1.63580 0.00050
A34_contig_705_111 vegetarian > vegan 1.77725 0.00050
A34_contig_705_112 vegetarian > vegan 2.30520 0.00050

🧭 Explore Read Mapping of CGC

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