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Cluster: A34.bin_17_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A34_contig_705 A34_contig_705_12 9511 10818 - GT4
pfam A34_contig_705 A34_contig_705_13 10831 11328 - Hexapep | Hexapep_2
NULL(UNKNOWN) A34_contig_705 A34_contig_705_14 11325 12482 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A34_contig_705 A34_contig_705_15 12485 13249 - GT2
TC A34_contig_705 A34_contig_705_16 13249 13995 - 9.B.18.1.2
pfam A34_contig_705 A34_contig_705_17 14018 15301 - DegT_DnrJ_EryC1
TC A34_contig_705 A34_contig_705_18 15357 17300 - 9.B.18.2.1
NULL(UNKNOWN) A34_contig_705 A34_contig_705_19 17365 17874 - NULL(UNKNOWN)
[View Structural Homologs]
TC A34_contig_705 A34_contig_705_20 18110 18457 - 9.B.18.1.1
Gene ID: A34_contig_705_12
Type: CAZyme
Location: 9511 - 10818 (-)
Gene ID: A34_contig_705_13
Type: pfam
Location: 10831 - 11328 (-)
Gene ID: A34_contig_705_14
Type:
Location: 11325 - 12482 (-)
Gene ID: A34_contig_705_15
Type: CAZyme
Location: 12485 - 13249 (-)
Gene ID: A34_contig_705_16
Type: TC
Location: 13249 - 13995 (-)
Gene ID: A34_contig_705_17
Type: pfam
Location: 14018 - 15301 (-)
Gene ID: A34_contig_705_18
Type: TC
Location: 15357 - 17300 (-)
Gene ID: A34_contig_705_19
Type:
Location: 17365 - 17874 (-)
Gene ID: A34_contig_705_20
Type: TC
Location: 18110 - 18457 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A34_contig_705_19 vegan > omnivore 2.80469 0.02923

🧭 Explore Read Mapping of CGC

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