Cluster: A34.bin_17_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: A34.bin_17
- CGC Family ID: CGCFAM_03081
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A34_contig_635 | A34_contig_635_323 | 337170 | 338018 | - | GH16_3 |
| pfam | A34_contig_635 | A34_contig_635_324 | 338015 | 340144 | - | Dockerin_1 |
| STP | A34_contig_635 | A34_contig_635_325 | 340174 | 341604 | - | SBP_bac_1 |
| TC | A34_contig_635 | A34_contig_635_326 | 341675 | 342667 | - | 3.A.1.1.11 |
| TC | A34_contig_635 | A34_contig_635_327 | 342692 | 343594 | - | 3.A.1.1.20 |
| pfam | A34_contig_635 | A34_contig_635_328 | 343591 | 345831 | - | DUF5696 |
| pfam | A34_contig_635 | A34_contig_635_329 | 345844 | 347943 | - | Yip1 |
| TC | A34_contig_635 | A34_contig_635_330 | 347962 | 348876 | - | 3.A.1.1.9 |
| pfam | A34_contig_635 | A34_contig_635_331 | 348873 | 349799 | - | BPD_transp_1 |
| STP | A34_contig_635 | A34_contig_635_332 | 349820 | 352576 | - | SBP_bac_1 |
| CAZyme | A34_contig_635 | A34_contig_635_333 | 352615 | 354123 | - | GH16_3 |
| TF | A34_contig_635 | A34_contig_635_334 | 354415 | 355239 | + | HTH_AraC | HTH_AraC |
| CAZyme | A34_contig_635 | A34_contig_635_335 | 355281 | 356972 | - | GH110 |
Gene ID: A34_contig_635_323
Type: CAZyme
Location: 337170 - 338018 (-)
Type: CAZyme
Location: 337170 - 338018 (-)
Gene ID: A34_contig_635_324
Type: pfam
Location: 338015 - 340144 (-)
Type: pfam
Location: 338015 - 340144 (-)
Gene ID: A34_contig_635_325
Type: STP
Location: 340174 - 341604 (-)
Type: STP
Location: 340174 - 341604 (-)
Gene ID: A34_contig_635_326
Type: TC
Location: 341675 - 342667 (-)
Type: TC
Location: 341675 - 342667 (-)
Gene ID: A34_contig_635_327
Type: TC
Location: 342692 - 343594 (-)
Type: TC
Location: 342692 - 343594 (-)
Gene ID: A34_contig_635_328
Type: pfam
Location: 343591 - 345831 (-)
Type: pfam
Location: 343591 - 345831 (-)
Gene ID: A34_contig_635_329
Type: pfam
Location: 345844 - 347943 (-)
Type: pfam
Location: 345844 - 347943 (-)
Gene ID: A34_contig_635_330
Type: TC
Location: 347962 - 348876 (-)
Type: TC
Location: 347962 - 348876 (-)
Gene ID: A34_contig_635_331
Type: pfam
Location: 348873 - 349799 (-)
Type: pfam
Location: 348873 - 349799 (-)
Gene ID: A34_contig_635_332
Type: STP
Location: 349820 - 352576 (-)
Type: STP
Location: 349820 - 352576 (-)
Gene ID: A34_contig_635_333
Type: CAZyme
Location: 352615 - 354123 (-)
Type: CAZyme
Location: 352615 - 354123 (-)
Gene ID: A34_contig_635_334
Type: TF
Location: 354415 - 355239 (+)
Type: TF
Location: 354415 - 355239 (+)
Gene ID: A34_contig_635_335
Type: CAZyme
Location: 355281 - 356972 (-)
Type: CAZyme
Location: 355281 - 356972 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900549055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A34_contig_635_323 | vegetarian > vegan | 2.12451 | 0.00050 |
| A34_contig_635_328 | vegetarian > vegan | 1.93737 | 0.00050 |