Cluster: A31.bin_31_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: A31.bin_31
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A31_contig_6113 | A31_contig_6113_172 | 171784 | 173121 | - | 2.A.22.5.3 |
| CAZyme | A31_contig_6113 | A31_contig_6113_173 | 173377 | 175446 | + | CBM22 | CE4 | GH11 |
| STP | A31_contig_6113 | A31_contig_6113_174 | 175553 | 177268 | - | HATPase_c | HisKA |
| TF | A31_contig_6113 | A31_contig_6113_175 | 177265 | 177942 | - | Trans_reg_C |
| CAZyme | A31_contig_6113 | A31_contig_6113_176 | 178105 | 180909 | + | CE2 | CE3 |
| CAZyme | A31_contig_6113 | A31_contig_6113_177 | 180922 | 182499 | + | GH5_1 |
| CAZyme | A31_contig_6113 | A31_contig_6113_178 | 182669 | 185227 | + | CBM3 | GH9 |
Gene ID: A31_contig_6113_172
Type: TC
Location: 171784 - 173121 (-)
Type: TC
Location: 171784 - 173121 (-)
Gene ID: A31_contig_6113_173
Type: CAZyme
Location: 173377 - 175446 (+)
Type: CAZyme
Location: 173377 - 175446 (+)
Gene ID: A31_contig_6113_174
Type: STP
Location: 175553 - 177268 (-)
Type: STP
Location: 175553 - 177268 (-)
Gene ID: A31_contig_6113_175
Type: TF
Location: 177265 - 177942 (-)
Type: TF
Location: 177265 - 177942 (-)
Gene ID: A31_contig_6113_176
Type: CAZyme
Location: 178105 - 180909 (+)
Type: CAZyme
Location: 178105 - 180909 (+)
Gene ID: A31_contig_6113_177
Type: CAZyme
Location: 180922 - 182499 (+)
Type: CAZyme
Location: 180922 - 182499 (+)
Gene ID: A31_contig_6113_178
Type: CAZyme
Location: 182669 - 185227 (+)
Type: CAZyme
Location: 182669 - 185227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CANPXN01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.