Cluster: A31.bin_31_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: A31.bin_31
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A31_contig_5987 | A31_contig_5987_58 | 62942 | 63499 | + | 3.A.1.25.5 |
| CAZyme | A31_contig_5987 | A31_contig_5987_59 | 63564 | 64991 | - | GT5 |
| pfam | A31_contig_5987 | A31_contig_5987_60 | 65018 | 66142 | - | NTP_transferase | Hexapep_GlmU |
| pfam | A31_contig_5987 | A31_contig_5987_61 | 66158 | 67360 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | A31_contig_5987 | A31_contig_5987_62 | 67418 | 69400 | - | CBM48 | GH13_9 |
Gene ID: A31_contig_5987_58
Type: TC
Location: 62942 - 63499 (+)
Type: TC
Location: 62942 - 63499 (+)
Gene ID: A31_contig_5987_59
Type: CAZyme
Location: 63564 - 64991 (-)
Type: CAZyme
Location: 63564 - 64991 (-)
Gene ID: A31_contig_5987_60
Type: pfam
Location: 65018 - 66142 (-)
Type: pfam
Location: 65018 - 66142 (-)
Gene ID: A31_contig_5987_61
Type: pfam
Location: 66158 - 67360 (-)
Type: pfam
Location: 66158 - 67360 (-)
Gene ID: A31_contig_5987_62
Type: CAZyme
Location: 67418 - 69400 (-)
Type: CAZyme
Location: 67418 - 69400 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CANPXN01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.