Cluster: A31.bin_31_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: A31.bin_31
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A31_contig_2910 | A31_contig_2910_153 | 166671 | 167258 | + | 4.F.1.1.8 |
| STP | A31_contig_2910 | A31_contig_2910_154 | 167424 | 167903 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | A31_contig_2910 | A31_contig_2910_155 | 167890 | 169773 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A31_contig_2910 | A31_contig_2910_156 | 169888 | 170814 | - | 2.A.6.4.2 |
| TC | A31_contig_2910 | A31_contig_2910_157 | 170807 | 172210 | - | 2.A.6.4.2 |
| pfam | A31_contig_2910 | A31_contig_2910_158 | 172407 | 173840 | - | Lyase_1 | ADSL_C |
| CAZyme | A31_contig_2910 | A31_contig_2910_159 | 174328 | 175359 | + | GH5_37 |
| pfam | A31_contig_2910 | A31_contig_2910_160 | 175738 | 176430 | + | Aldolase_II |
| NULL(UNKNOWN) | A31_contig_2910 | A31_contig_2910_161 | 176441 | 176950 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A31_contig_2910 | A31_contig_2910_162 | 177048 | 179441 | - | GH59 |
| STP | A31_contig_2910 | A31_contig_2910_163 | 179513 | 181210 | - | EAL | GGDEF |
| TC | A31_contig_2910 | A31_contig_2910_164 | 181537 | 184263 | - | 3.A.1.122.13 |
Gene ID: A31_contig_2910_153
Type: TC
Location: 166671 - 167258 (+)
Type: TC
Location: 166671 - 167258 (+)
Gene ID: A31_contig_2910_154
Type: STP
Location: 167424 - 167903 (+)
Type: STP
Location: 167424 - 167903 (+)
Gene ID: A31_contig_2910_155
Type:
Location: 167890 - 169773 (+)
Type:
Location: 167890 - 169773 (+)
Gene ID: A31_contig_2910_156
Type: TC
Location: 169888 - 170814 (-)
Type: TC
Location: 169888 - 170814 (-)
Gene ID: A31_contig_2910_157
Type: TC
Location: 170807 - 172210 (-)
Type: TC
Location: 170807 - 172210 (-)
Gene ID: A31_contig_2910_158
Type: pfam
Location: 172407 - 173840 (-)
Type: pfam
Location: 172407 - 173840 (-)
Gene ID: A31_contig_2910_159
Type: CAZyme
Location: 174328 - 175359 (+)
Type: CAZyme
Location: 174328 - 175359 (+)
Gene ID: A31_contig_2910_160
Type: pfam
Location: 175738 - 176430 (+)
Type: pfam
Location: 175738 - 176430 (+)
Gene ID: A31_contig_2910_161
Type:
Location: 176441 - 176950 (+)
Type:
Location: 176441 - 176950 (+)
Gene ID: A31_contig_2910_162
Type: CAZyme
Location: 177048 - 179441 (-)
Type: CAZyme
Location: 177048 - 179441 (-)
Gene ID: A31_contig_2910_163
Type: STP
Location: 179513 - 181210 (-)
Type: STP
Location: 179513 - 181210 (-)
Gene ID: A31_contig_2910_164
Type: TC
Location: 181537 - 184263 (-)
Type: TC
Location: 181537 - 184263 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CANPXN01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.