Cluster: A19.bin_50_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: A19.bin_50
- CGC Family ID: CGCFAM_00748
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_2826 | A19_contig_2826_227 | 285277 | 286287 | - | GH130_2 |
| CAZyme | A19_contig_2826 | A19_contig_2826_228 | 286554 | 288740 | + | GH2 |
| STP | A19_contig_2826 | A19_contig_2826_229 | 288764 | 291619 | + | SBP_bac_1 |
| TC | A19_contig_2826 | A19_contig_2826_230 | 291658 | 292587 | + | 3.A.1.1.11 |
| TC | A19_contig_2826 | A19_contig_2826_231 | 292591 | 293433 | + | 3.A.1.1.39 |
| pfam | A19_contig_2826 | A19_contig_2826_232 | 293490 | 295586 | + | Yip1 |
| pfam | A19_contig_2826 | A19_contig_2826_233 | 295621 | 297846 | + | DUF5696 |
| TC | A19_contig_2826 | A19_contig_2826_234 | 297839 | 298735 | + | 3.A.1.1.11 |
| TC | A19_contig_2826 | A19_contig_2826_235 | 298759 | 299772 | + | 3.A.1.1.20 |
| CAZyme | A19_contig_2826 | A19_contig_2826_236 | 299785 | 300726 | + | GH32 |
| NULL(UNKNOWN) | A19_contig_2826 | A19_contig_2826_237 | 300790 | 301389 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A19_contig_2826 | A19_contig_2826_238 | 301621 | 302157 | - | 2.A.87.3.2 |
Gene ID: A19_contig_2826_227
Type: CAZyme
Location: 285277 - 286287 (-)
Type: CAZyme
Location: 285277 - 286287 (-)
Gene ID: A19_contig_2826_228
Type: CAZyme
Location: 286554 - 288740 (+)
Type: CAZyme
Location: 286554 - 288740 (+)
Gene ID: A19_contig_2826_229
Type: STP
Location: 288764 - 291619 (+)
Type: STP
Location: 288764 - 291619 (+)
Gene ID: A19_contig_2826_230
Type: TC
Location: 291658 - 292587 (+)
Type: TC
Location: 291658 - 292587 (+)
Gene ID: A19_contig_2826_231
Type: TC
Location: 292591 - 293433 (+)
Type: TC
Location: 292591 - 293433 (+)
Gene ID: A19_contig_2826_232
Type: pfam
Location: 293490 - 295586 (+)
Type: pfam
Location: 293490 - 295586 (+)
Gene ID: A19_contig_2826_233
Type: pfam
Location: 295621 - 297846 (+)
Type: pfam
Location: 295621 - 297846 (+)
Gene ID: A19_contig_2826_234
Type: TC
Location: 297839 - 298735 (+)
Type: TC
Location: 297839 - 298735 (+)
Gene ID: A19_contig_2826_235
Type: TC
Location: 298759 - 299772 (+)
Type: TC
Location: 298759 - 299772 (+)
Gene ID: A19_contig_2826_236
Type: CAZyme
Location: 299785 - 300726 (+)
Type: CAZyme
Location: 299785 - 300726 (+)
Gene ID: A19_contig_2826_237
Type:
Location: 300790 - 301389 (-)
Type:
Location: 300790 - 301389 (-)
Gene ID: A19_contig_2826_238
Type: TC
Location: 301621 - 302157 (-)
Type: TC
Location: 301621 - 302157 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934630995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.