Cluster: A19.bin_50_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: A19.bin_50
- CGC Family ID: CGCFAM_01117
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_2826 | A19_contig_2826_206 | 249252 | 250634 | - | GH43_5 |
| CAZyme | A19_contig_2826 | A19_contig_2826_207 | 250654 | 252168 | - | GH43_5 |
| STP | A19_contig_2826 | A19_contig_2826_208 | 252190 | 253581 | - | SBP_bac_1 |
| TC | A19_contig_2826 | A19_contig_2826_209 | 253704 | 254660 | - | 3.A.1.1.24 |
| TC | A19_contig_2826 | A19_contig_2826_210 | 254677 | 255573 | - | 3.A.1.1.11 |
| pfam | A19_contig_2826 | A19_contig_2826_211 | 255609 | 257816 | - | DUF5696 |
| pfam | A19_contig_2826 | A19_contig_2826_212 | 257803 | 259827 | - | Yip1 |
| TC | A19_contig_2826 | A19_contig_2826_213 | 259847 | 260716 | - | 3.A.1.1.39 |
| TC | A19_contig_2826 | A19_contig_2826_214 | 260721 | 261608 | - | 3.A.1.1.11 |
| STP | A19_contig_2826 | A19_contig_2826_215 | 261631 | 264585 | - | SBP_bac_1 |
| CAZyme | A19_contig_2826 | A19_contig_2826_216 | 264773 | 266536 | - | GH2 |
Gene ID: A19_contig_2826_206
Type: CAZyme
Location: 249252 - 250634 (-)
Type: CAZyme
Location: 249252 - 250634 (-)
Gene ID: A19_contig_2826_207
Type: CAZyme
Location: 250654 - 252168 (-)
Type: CAZyme
Location: 250654 - 252168 (-)
Gene ID: A19_contig_2826_208
Type: STP
Location: 252190 - 253581 (-)
Type: STP
Location: 252190 - 253581 (-)
Gene ID: A19_contig_2826_209
Type: TC
Location: 253704 - 254660 (-)
Type: TC
Location: 253704 - 254660 (-)
Gene ID: A19_contig_2826_210
Type: TC
Location: 254677 - 255573 (-)
Type: TC
Location: 254677 - 255573 (-)
Gene ID: A19_contig_2826_211
Type: pfam
Location: 255609 - 257816 (-)
Type: pfam
Location: 255609 - 257816 (-)
Gene ID: A19_contig_2826_212
Type: pfam
Location: 257803 - 259827 (-)
Type: pfam
Location: 257803 - 259827 (-)
Gene ID: A19_contig_2826_213
Type: TC
Location: 259847 - 260716 (-)
Type: TC
Location: 259847 - 260716 (-)
Gene ID: A19_contig_2826_214
Type: TC
Location: 260721 - 261608 (-)
Type: TC
Location: 260721 - 261608 (-)
Gene ID: A19_contig_2826_215
Type: STP
Location: 261631 - 264585 (-)
Type: STP
Location: 261631 - 264585 (-)
Gene ID: A19_contig_2826_216
Type: CAZyme
Location: 264773 - 266536 (-)
Type: CAZyme
Location: 264773 - 266536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934630995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.