Cluster: A19.bin_50_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.bin_50
- CGC Family ID: CGCFAM_00847
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_6447 | A19_contig_6447_134 | 143117 | 144499 | - | 2.A.22.5.3 |
| STP | A19_contig_6447 | A19_contig_6447_135 | 144701 | 146866 | + | EAL | GGDEF |
| TF | A19_contig_6447 | A19_contig_6447_136 | 147025 | 147789 | + | HTH_3 |
| CAZyme | A19_contig_6447 | A19_contig_6447_137 | 147854 | 150019 | - | GH112 |
| pfam | A19_contig_6447 | A19_contig_6447_138 | 150136 | 150345 | - | DUF6903 |
| TC | A19_contig_6447 | A19_contig_6447_139 | 150358 | 151239 | - | 3.A.1.1.18 |
| TC | A19_contig_6447 | A19_contig_6447_140 | 151258 | 152154 | - | 3.A.1.1.20 |
Gene ID: A19_contig_6447_134
Type: TC
Location: 143117 - 144499 (-)
Type: TC
Location: 143117 - 144499 (-)
Gene ID: A19_contig_6447_135
Type: STP
Location: 144701 - 146866 (+)
Type: STP
Location: 144701 - 146866 (+)
Gene ID: A19_contig_6447_136
Type: TF
Location: 147025 - 147789 (+)
Type: TF
Location: 147025 - 147789 (+)
Gene ID: A19_contig_6447_137
Type: CAZyme
Location: 147854 - 150019 (-)
Type: CAZyme
Location: 147854 - 150019 (-)
Gene ID: A19_contig_6447_138
Type: pfam
Location: 150136 - 150345 (-)
Type: pfam
Location: 150136 - 150345 (-)
Gene ID: A19_contig_6447_139
Type: TC
Location: 150358 - 151239 (-)
Type: TC
Location: 150358 - 151239 (-)
Gene ID: A19_contig_6447_140
Type: TC
Location: 151258 - 152154 (-)
Type: TC
Location: 151258 - 152154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934630995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.