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Cluster: A19.bin_50_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A19_contig_7859 A19_contig_7859_36 33386 34807 - GH159
CAZyme A19_contig_7859 A19_contig_7859_37 34858 37104 - GH35
TC A19_contig_7859 A19_contig_7859_38 37139 38140 - 3.A.1.1.11
TC A19_contig_7859 A19_contig_7859_39 38171 39088 - 3.A.1.1.11
pfam A19_contig_7859 A19_contig_7859_40 39085 41325 - DUF5696
pfam A19_contig_7859 A19_contig_7859_41 41437 43542 - NHL | Yip1
TC A19_contig_7859 A19_contig_7859_42 43589 44509 - 3.A.1.1.36
TC A19_contig_7859 A19_contig_7859_43 44598 45524 - 3.A.1.1.11
STP A19_contig_7859 A19_contig_7859_44 45521 48433 - SBP_bac_1
CAZyme A19_contig_7859 A19_contig_7859_45 48441 50183 - GH123
TF A19_contig_7859 A19_contig_7859_46 50236 51141 - HTH_5
CAZyme A19_contig_7859 A19_contig_7859_47 51181 52074 - GH43_17
Gene ID: A19_contig_7859_36
Type: CAZyme
Location: 33386 - 34807 (-)
Gene ID: A19_contig_7859_37
Type: CAZyme
Location: 34858 - 37104 (-)
Gene ID: A19_contig_7859_38
Type: TC
Location: 37139 - 38140 (-)
Gene ID: A19_contig_7859_39
Type: TC
Location: 38171 - 39088 (-)
Gene ID: A19_contig_7859_40
Type: pfam
Location: 39085 - 41325 (-)
Gene ID: A19_contig_7859_41
Type: pfam
Location: 41437 - 43542 (-)
Gene ID: A19_contig_7859_42
Type: TC
Location: 43589 - 44509 (-)
Gene ID: A19_contig_7859_43
Type: TC
Location: 44598 - 45524 (-)
Gene ID: A19_contig_7859_44
Type: STP
Location: 45521 - 48433 (-)
Gene ID: A19_contig_7859_45
Type: CAZyme
Location: 48441 - 50183 (-)
Gene ID: A19_contig_7859_46
Type: TF
Location: 50236 - 51141 (-)
Gene ID: A19_contig_7859_47
Type: CAZyme
Location: 51181 - 52074 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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