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Cluster: A19.bin_50_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A19_contig_6079 A19_contig_6079_441 516585 517622 + 3.A.1.5.12
TC A19_contig_6079 A19_contig_6079_442 517615 518658 + 3.A.1.5.29
TC A19_contig_6079 A19_contig_6079_443 518655 520640 + 3.A.1.5.29
TC A19_contig_6079 A19_contig_6079_444 520708 521694 + 3.A.1.5.29
TC A19_contig_6079 A19_contig_6079_445 521704 522879 + 3.A.1.5.29
NULL(UNKNOWN) A19_contig_6079 A19_contig_6079_446 522904 524979 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A19_contig_6079 A19_contig_6079_447 525002 526330 + Glyco_tran_WbsX
CAZyme A19_contig_6079 A19_contig_6079_448 526344 527510 + CE2
CAZyme A19_contig_6079 A19_contig_6079_449 528757 531519 - CBM32
NULL(UNKNOWN) A19_contig_6079 A19_contig_6079_450 531802 533262 - NULL(UNKNOWN)
[View Structural Homologs]
TC A19_contig_6079 A19_contig_6079_451 533300 534934 - 3.A.1.1.9
pfam A19_contig_6079 A19_contig_6079_452 534997 535845 - F5_F8_type_C | F5_F8_type_C_2
CAZyme A19_contig_6079 A19_contig_6079_453 535842 537632 - GH123
NULL(UNKNOWN) A19_contig_6079 A19_contig_6079_454 537639 540242 - NULL(UNKNOWN)
[View Structural Homologs]
TF A19_contig_6079 A19_contig_6079_455 540403 541305 + HTH_AraC
TC A19_contig_6079 A19_contig_6079_456 541308 542246 - 3.A.1.1.17
TC A19_contig_6079 A19_contig_6079_457 542265 543203 - 3.A.1.1.36
TC A19_contig_6079 A19_contig_6079_458 543217 544101 - 3.A.1.1.11
Gene ID: A19_contig_6079_441
Type: TC
Location: 516585 - 517622 (+)
Gene ID: A19_contig_6079_442
Type: TC
Location: 517615 - 518658 (+)
Gene ID: A19_contig_6079_443
Type: TC
Location: 518655 - 520640 (+)
Gene ID: A19_contig_6079_444
Type: TC
Location: 520708 - 521694 (+)
Gene ID: A19_contig_6079_445
Type: TC
Location: 521704 - 522879 (+)
Gene ID: A19_contig_6079_446
Type:
Location: 522904 - 524979 (+)
Gene ID: A19_contig_6079_447
Type: pfam
Location: 525002 - 526330 (+)
Gene ID: A19_contig_6079_448
Type: CAZyme
Location: 526344 - 527510 (+)
Gene ID: A19_contig_6079_449
Type: CAZyme
Location: 528757 - 531519 (-)
Gene ID: A19_contig_6079_450
Type:
Location: 531802 - 533262 (-)
Gene ID: A19_contig_6079_451
Type: TC
Location: 533300 - 534934 (-)
Gene ID: A19_contig_6079_452
Type: pfam
Location: 534997 - 535845 (-)
Gene ID: A19_contig_6079_453
Type: CAZyme
Location: 535842 - 537632 (-)
Gene ID: A19_contig_6079_454
Type:
Location: 537639 - 540242 (-)
Gene ID: A19_contig_6079_455
Type: TF
Location: 540403 - 541305 (+)
Gene ID: A19_contig_6079_456
Type: TC
Location: 541308 - 542246 (-)
Gene ID: A19_contig_6079_457
Type: TC
Location: 542265 - 543203 (-)
Gene ID: A19_contig_6079_458
Type: TC
Location: 543217 - 544101 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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