Cluster: A19.bin_50_CGC32
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: A19.bin_50
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_6079 | A19_contig_6079_362 | 404744 | 406690 | + | GH42 |
| CAZyme | A19_contig_6079 | A19_contig_6079_363 | 407052 | 408299 | + | GH28 |
| TF | A19_contig_6079 | A19_contig_6079_364 | 408563 | 409435 | - | HTH_AraC |
| CAZyme | A19_contig_6079 | A19_contig_6079_365 | 409622 | 410779 | + | GH109 |
| NULL(UNKNOWN) | A19_contig_6079 | A19_contig_6079_366 | 410802 | 411692 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A19_contig_6079 | A19_contig_6079_367 | 411746 | 413509 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A19_contig_6079 | A19_contig_6079_368 | 413715 | 415775 | + | GH92 |
| CAZyme | A19_contig_6079 | A19_contig_6079_369 | 416087 | 418402 | - | GH2 |
| pfam | A19_contig_6079 | A19_contig_6079_370 | 418561 | 420411 | - | GxGYxYP_C | GxGYxYP_N_2nd |
| pfam | A19_contig_6079 | A19_contig_6079_371 | 420455 | 422482 | - | GxGYxYP_C | GxGYxYP_N_2nd |
| TC | A19_contig_6079 | A19_contig_6079_372 | 422542 | 423471 | - | 3.A.1.1.11 |
| TC | A19_contig_6079 | A19_contig_6079_373 | 423501 | 424400 | - | 3.A.1.1.20 |
Gene ID: A19_contig_6079_362
Type: CAZyme
Location: 404744 - 406690 (+)
Type: CAZyme
Location: 404744 - 406690 (+)
Gene ID: A19_contig_6079_363
Type: CAZyme
Location: 407052 - 408299 (+)
Type: CAZyme
Location: 407052 - 408299 (+)
Gene ID: A19_contig_6079_364
Type: TF
Location: 408563 - 409435 (-)
Type: TF
Location: 408563 - 409435 (-)
Gene ID: A19_contig_6079_365
Type: CAZyme
Location: 409622 - 410779 (+)
Type: CAZyme
Location: 409622 - 410779 (+)
Gene ID: A19_contig_6079_366
Type:
Location: 410802 - 411692 (+)
Type:
Location: 410802 - 411692 (+)
Gene ID: A19_contig_6079_367
Type:
Location: 411746 - 413509 (+)
Type:
Location: 411746 - 413509 (+)
Gene ID: A19_contig_6079_368
Type: CAZyme
Location: 413715 - 415775 (+)
Type: CAZyme
Location: 413715 - 415775 (+)
Gene ID: A19_contig_6079_369
Type: CAZyme
Location: 416087 - 418402 (-)
Type: CAZyme
Location: 416087 - 418402 (-)
Gene ID: A19_contig_6079_370
Type: pfam
Location: 418561 - 420411 (-)
Type: pfam
Location: 418561 - 420411 (-)
Gene ID: A19_contig_6079_371
Type: pfam
Location: 420455 - 422482 (-)
Type: pfam
Location: 420455 - 422482 (-)
Gene ID: A19_contig_6079_372
Type: TC
Location: 422542 - 423471 (-)
Type: TC
Location: 422542 - 423471 (-)
Gene ID: A19_contig_6079_373
Type: TC
Location: 423501 - 424400 (-)
Type: TC
Location: 423501 - 424400 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934630995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.