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Cluster: A19.bin_50_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A19_contig_6079 A19_contig_6079_313 331997 333121 - 2.A.21.9.2
TF A19_contig_6079 A19_contig_6079_314 333114 333809 - Trans_reg_C
NULL(UNKNOWN) A19_contig_6079 A19_contig_6079_315 334038 334190 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A19_contig_6079 A19_contig_6079_316 334384 336651 + GH2
TF A19_contig_6079 A19_contig_6079_317 336704 337615 - HTH_AraC | HTH_AraC
STP A19_contig_6079 A19_contig_6079_318 337920 340727 + SBP_bac_1
TC A19_contig_6079 A19_contig_6079_319 340752 341687 + 3.A.1.1.23
TC A19_contig_6079 A19_contig_6079_320 341708 342571 + 3.A.1.1.48
pfam A19_contig_6079 A19_contig_6079_321 342591 344696 + Yip1
pfam A19_contig_6079 A19_contig_6079_322 344709 347279 + DUF5696
TC A19_contig_6079 A19_contig_6079_323 347276 348184 + 3.A.1.1.11
TC A19_contig_6079 A19_contig_6079_324 348177 349133 + 3.A.1.1.36
Gene ID: A19_contig_6079_313
Type: TC
Location: 331997 - 333121 (-)
Gene ID: A19_contig_6079_314
Type: TF
Location: 333114 - 333809 (-)
Gene ID: A19_contig_6079_315
Type:
Location: 334038 - 334190 (+)
Gene ID: A19_contig_6079_316
Type: CAZyme
Location: 334384 - 336651 (+)
Gene ID: A19_contig_6079_317
Type: TF
Location: 336704 - 337615 (-)
Gene ID: A19_contig_6079_318
Type: STP
Location: 337920 - 340727 (+)
Gene ID: A19_contig_6079_319
Type: TC
Location: 340752 - 341687 (+)
Gene ID: A19_contig_6079_320
Type: TC
Location: 341708 - 342571 (+)
Gene ID: A19_contig_6079_321
Type: pfam
Location: 342591 - 344696 (+)
Gene ID: A19_contig_6079_322
Type: pfam
Location: 344709 - 347279 (+)
Gene ID: A19_contig_6079_323
Type: TC
Location: 347276 - 348184 (+)
Gene ID: A19_contig_6079_324
Type: TC
Location: 348177 - 349133 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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