Cluster: A19.bin_50_CGC30
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 5
- Substrate:
- Genome ID: A19.bin_50
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_6079 | A19_contig_6079_260 | 260880 | 262679 | + | 3.A.1.111.2 |
| CAZyme | A19_contig_6079 | A19_contig_6079_261 | 263308 | 264543 | + | CE2 |
| CAZyme | A19_contig_6079 | A19_contig_6079_262 | 264554 | 265798 | + | CE2 |
| NULL(UNKNOWN) | A19_contig_6079 | A19_contig_6079_263 | 265870 | 269391 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A19_contig_6079 | A19_contig_6079_264 | 269508 | 271805 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A19_contig_6079 | A19_contig_6079_265 | 271892 | 273133 | - | GH43_26 |
| NULL(UNKNOWN) | A19_contig_6079 | A19_contig_6079_266 | 273156 | 274229 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A19_contig_6079 | A19_contig_6079_267 | 274250 | 275590 | - | Glyco_hydro_42 |
| TC | A19_contig_6079 | A19_contig_6079_268 | 275658 | 276827 | - | 3.A.1.125.1 |
| TC | A19_contig_6079 | A19_contig_6079_269 | 276820 | 277494 | - | 3.A.1.122.14 |
| pfam | A19_contig_6079 | A19_contig_6079_270 | 277565 | 280357 | - | FtsX | FtsX | MacB_PCD |
| TC | A19_contig_6079 | A19_contig_6079_271 | 280912 | 282567 | + | 3.A.1.1.9 |
| STP | A19_contig_6079 | A19_contig_6079_272 | 282695 | 285589 | + | SBP_bac_1 |
| TC | A19_contig_6079 | A19_contig_6079_273 | 285600 | 286499 | + | 3.A.1.1.36 |
| TC | A19_contig_6079 | A19_contig_6079_274 | 286516 | 287433 | + | 3.A.1.1.39 |
| pfam | A19_contig_6079 | A19_contig_6079_275 | 287446 | 289584 | + | Yip1 |
| pfam | A19_contig_6079 | A19_contig_6079_276 | 289610 | 291793 | + | DUF5696 |
| TC | A19_contig_6079 | A19_contig_6079_277 | 291816 | 292754 | + | 3.A.1.1.11 |
| TC | A19_contig_6079 | A19_contig_6079_278 | 292751 | 293680 | + | 3.A.1.1.11 |
| sulfatase | A19_contig_6079 | A19_contig_6079_279 | 293733 | 294674 | + | S1_17 |
| NULL(UNKNOWN) | A19_contig_6079 | A19_contig_6079_280 | 294731 | 295756 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A19_contig_6079 | A19_contig_6079_281 | 295935 | 298577 | + | GH129 |
| TF | A19_contig_6079 | A19_contig_6079_282 | 298611 | 299402 | + | HTH_AraC |
| CAZyme | A19_contig_6079 | A19_contig_6079_283 | 299422 | 300972 | + | GH32 |
Gene ID: A19_contig_6079_260
Type: TC
Location: 260880 - 262679 (+)
Type: TC
Location: 260880 - 262679 (+)
Gene ID: A19_contig_6079_261
Type: CAZyme
Location: 263308 - 264543 (+)
Type: CAZyme
Location: 263308 - 264543 (+)
Gene ID: A19_contig_6079_262
Type: CAZyme
Location: 264554 - 265798 (+)
Type: CAZyme
Location: 264554 - 265798 (+)
Gene ID: A19_contig_6079_263
Type:
Location: 265870 - 269391 (+)
Type:
Location: 265870 - 269391 (+)
Gene ID: A19_contig_6079_264
Type:
Location: 269508 - 271805 (+)
Type:
Location: 269508 - 271805 (+)
Gene ID: A19_contig_6079_265
Type: CAZyme
Location: 271892 - 273133 (-)
Type: CAZyme
Location: 271892 - 273133 (-)
Gene ID: A19_contig_6079_266
Type:
Location: 273156 - 274229 (-)
Type:
Location: 273156 - 274229 (-)
Gene ID: A19_contig_6079_267
Type: pfam
Location: 274250 - 275590 (-)
Type: pfam
Location: 274250 - 275590 (-)
Gene ID: A19_contig_6079_268
Type: TC
Location: 275658 - 276827 (-)
Type: TC
Location: 275658 - 276827 (-)
Gene ID: A19_contig_6079_269
Type: TC
Location: 276820 - 277494 (-)
Type: TC
Location: 276820 - 277494 (-)
Gene ID: A19_contig_6079_270
Type: pfam
Location: 277565 - 280357 (-)
Type: pfam
Location: 277565 - 280357 (-)
Gene ID: A19_contig_6079_271
Type: TC
Location: 280912 - 282567 (+)
Type: TC
Location: 280912 - 282567 (+)
Gene ID: A19_contig_6079_272
Type: STP
Location: 282695 - 285589 (+)
Type: STP
Location: 282695 - 285589 (+)
Gene ID: A19_contig_6079_273
Type: TC
Location: 285600 - 286499 (+)
Type: TC
Location: 285600 - 286499 (+)
Gene ID: A19_contig_6079_274
Type: TC
Location: 286516 - 287433 (+)
Type: TC
Location: 286516 - 287433 (+)
Gene ID: A19_contig_6079_275
Type: pfam
Location: 287446 - 289584 (+)
Type: pfam
Location: 287446 - 289584 (+)
Gene ID: A19_contig_6079_276
Type: pfam
Location: 289610 - 291793 (+)
Type: pfam
Location: 289610 - 291793 (+)
Gene ID: A19_contig_6079_277
Type: TC
Location: 291816 - 292754 (+)
Type: TC
Location: 291816 - 292754 (+)
Gene ID: A19_contig_6079_278
Type: TC
Location: 292751 - 293680 (+)
Type: TC
Location: 292751 - 293680 (+)
Gene ID: A19_contig_6079_279
Type: sulfatase
Location: 293733 - 294674 (+)
Type: sulfatase
Location: 293733 - 294674 (+)
Gene ID: A19_contig_6079_280
Type:
Location: 294731 - 295756 (-)
Type:
Location: 294731 - 295756 (-)
Gene ID: A19_contig_6079_281
Type: CAZyme
Location: 295935 - 298577 (+)
Type: CAZyme
Location: 295935 - 298577 (+)
Gene ID: A19_contig_6079_282
Type: TF
Location: 298611 - 299402 (+)
Type: TF
Location: 298611 - 299402 (+)
Gene ID: A19_contig_6079_283
Type: CAZyme
Location: 299422 - 300972 (+)
Type: CAZyme
Location: 299422 - 300972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934630995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.