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Cluster: A19.bin_50_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A19_contig_6302 A19_contig_6302_48 67635 68897 + GH109
TC A19_contig_6302 A19_contig_6302_49 69031 69870 - 3.D.6.1.3
TC A19_contig_6302 A19_contig_6302_50 69898 70500 - 3.D.6.1.2
TC A19_contig_6302 A19_contig_6302_51 70503 71201 - 3.D.6.1.2
pfam A19_contig_6302 A19_contig_6302_52 71203 71766 - FMN_bind
TC A19_contig_6302 A19_contig_6302_53 71763 72752 - 3.D.6.1.2
TC A19_contig_6302 A19_contig_6302_54 72765 74078 - 3.D.6.1.2
pfam A19_contig_6302 A19_contig_6302_55 74698 75705 + ABC_sub_bind
TC A19_contig_6302 A19_contig_6302_56 75747 76658 + 3.A.1.34.1
TC A19_contig_6302 A19_contig_6302_57 76651 77424 + 3.A.1.34.1
STP A19_contig_6302 A19_contig_6302_58 77454 78833 + PALP
TC A19_contig_6302 A19_contig_6302_59 79122 79886 - 3.A.1.3.24
TC A19_contig_6302 A19_contig_6302_60 79900 80601 - 3.A.1.3.14
TC A19_contig_6302 A19_contig_6302_61 80742 81617 - 3.A.1.3.27
Gene ID: A19_contig_6302_48
Type: CAZyme
Location: 67635 - 68897 (+)
Gene ID: A19_contig_6302_49
Type: TC
Location: 69031 - 69870 (-)
Gene ID: A19_contig_6302_50
Type: TC
Location: 69898 - 70500 (-)
Gene ID: A19_contig_6302_51
Type: TC
Location: 70503 - 71201 (-)
Gene ID: A19_contig_6302_52
Type: pfam
Location: 71203 - 71766 (-)
Gene ID: A19_contig_6302_53
Type: TC
Location: 71763 - 72752 (-)
Gene ID: A19_contig_6302_54
Type: TC
Location: 72765 - 74078 (-)
Gene ID: A19_contig_6302_55
Type: pfam
Location: 74698 - 75705 (+)
Gene ID: A19_contig_6302_56
Type: TC
Location: 75747 - 76658 (+)
Gene ID: A19_contig_6302_57
Type: TC
Location: 76651 - 77424 (+)
Gene ID: A19_contig_6302_58
Type: STP
Location: 77454 - 78833 (+)
Gene ID: A19_contig_6302_59
Type: TC
Location: 79122 - 79886 (-)
Gene ID: A19_contig_6302_60
Type: TC
Location: 79900 - 80601 (-)
Gene ID: A19_contig_6302_61
Type: TC
Location: 80742 - 81617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A19_contig_6302_58 omnivore > vegan 1.53551 0.01518
A19_contig_6302_58 vegetarian > vegan 1.58922 0.00085

🧭 Explore Read Mapping of CGC

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