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Cluster: A19.bin_50_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A19_contig_7298 A19_contig_7298_68 82634 83872 - 9.A.40.2.4
TC A19_contig_7298 A19_contig_7298_69 83900 84823 - 2.A.69.4.3
pfam A19_contig_7298 A19_contig_7298_70 84857 85774 - Lactamase_B
peptidase A19_contig_7298 A19_contig_7298_71 85979 87385 - M18.UPW
CAZyme A19_contig_7298 A19_contig_7298_72 87419 88036 - GH23
Gene ID: A19_contig_7298_68
Type: TC
Location: 82634 - 83872 (-)
Gene ID: A19_contig_7298_69
Type: TC
Location: 83900 - 84823 (-)
Gene ID: A19_contig_7298_70
Type: pfam
Location: 84857 - 85774 (-)
Gene ID: A19_contig_7298_71
Type: peptidase
Location: 85979 - 87385 (-)
Gene ID: A19_contig_7298_72
Type: CAZyme
Location: 87419 - 88036 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A19_contig_7298_71 omnivore > vegan 1.16235 0.01518

🧭 Explore Read Mapping of CGC

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