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Cluster: A19.bin_50_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A19_contig_2809 A19_contig_2809_63 64163 66328 - GH2
STP A19_contig_2809 A19_contig_2809_64 66373 67668 - SBP_bac_1
TF A19_contig_2809 A19_contig_2809_65 67703 69265 - HTH_AraC
TC A19_contig_2809 A19_contig_2809_66 69285 71102 - 8.A.59.2.1
STP A19_contig_2809 A19_contig_2809_67 71255 72643 - SBP_bac_1
CAZyme A19_contig_2809 A19_contig_2809_68 72917 74488 - GH5_41
CAZyme A19_contig_2809 A19_contig_2809_69 74516 75847 - GH5_41
TC A19_contig_2809 A19_contig_2809_70 75866 76846 - 3.A.1.1.20
TC A19_contig_2809 A19_contig_2809_71 76858 77760 - 3.A.1.1.11
Gene ID: A19_contig_2809_63
Type: CAZyme
Location: 64163 - 66328 (-)
Gene ID: A19_contig_2809_64
Type: STP
Location: 66373 - 67668 (-)
Gene ID: A19_contig_2809_65
Type: TF
Location: 67703 - 69265 (-)
Gene ID: A19_contig_2809_66
Type: TC
Location: 69285 - 71102 (-)
Gene ID: A19_contig_2809_67
Type: STP
Location: 71255 - 72643 (-)
Gene ID: A19_contig_2809_68
Type: CAZyme
Location: 72917 - 74488 (-)
Gene ID: A19_contig_2809_69
Type: CAZyme
Location: 74516 - 75847 (-)
Gene ID: A19_contig_2809_70
Type: TC
Location: 75866 - 76846 (-)
Gene ID: A19_contig_2809_71
Type: TC
Location: 76858 - 77760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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