Cluster: A19.bin_36_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: A19.bin_36
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_900 | 935906 | 937528 | - | 3.A.1.5.2 |
| TC | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_901 | 937560 | 938720 | - | 3.A.18.1.1 |
| CAZyme | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_902 | 938990 | 941404 | - | GT35 |
| CAZyme | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_903 | 941412 | 942854 | - | GT5 |
| pfam | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_904 | 942861 | 943958 | - | NTP_transferase | Hexapep_GlmU |
| pfam | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_905 | 943955 | 945169 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_906 | 945166 | 947022 | - | CBM48 | GH13_9 |
Gene ID: A19_contig_255_corr_4_s1_np12_900
Type: TC
Location: 935906 - 937528 (-)
Type: TC
Location: 935906 - 937528 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_901
Type: TC
Location: 937560 - 938720 (-)
Type: TC
Location: 937560 - 938720 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_902
Type: CAZyme
Location: 938990 - 941404 (-)
Type: CAZyme
Location: 938990 - 941404 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_903
Type: CAZyme
Location: 941412 - 942854 (-)
Type: CAZyme
Location: 941412 - 942854 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_904
Type: pfam
Location: 942861 - 943958 (-)
Type: pfam
Location: 942861 - 943958 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_905
Type: pfam
Location: 943955 - 945169 (-)
Type: pfam
Location: 943955 - 945169 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_906
Type: CAZyme
Location: 945166 - 947022 (-)
Type: CAZyme
Location: 945166 - 947022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp003539495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.