Cluster: A19.bin_36_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.bin_36
- CGC Family ID: CGCFAM_06696
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_565 | A19_contig_565_541 | 560422 | 562308 | - | 3.A.1.135.5 |
| TC | A19_contig_565 | A19_contig_565_542 | 562301 | 564040 | - | 3.A.1.135.5 |
| TF | A19_contig_565 | A19_contig_565_543 | 564037 | 564495 | - | MarR |
| CAZyme | A19_contig_565 | A19_contig_565_544 | 565364 | 566650 | - | GH18 |
| TC | A19_contig_565 | A19_contig_565_545 | 566779 | 568767 | + | 9.A.8.1.5 |
| TC | A19_contig_565 | A19_contig_565_546 | 568786 | 569694 | - | 9.A.5.3.1 |
Gene ID: A19_contig_565_541
Type: TC
Location: 560422 - 562308 (-)
Type: TC
Location: 560422 - 562308 (-)
Gene ID: A19_contig_565_542
Type: TC
Location: 562301 - 564040 (-)
Type: TC
Location: 562301 - 564040 (-)
Gene ID: A19_contig_565_543
Type: TF
Location: 564037 - 564495 (-)
Type: TF
Location: 564037 - 564495 (-)
Gene ID: A19_contig_565_544
Type: CAZyme
Location: 565364 - 566650 (-)
Type: CAZyme
Location: 565364 - 566650 (-)
Gene ID: A19_contig_565_545
Type: TC
Location: 566779 - 568767 (+)
Type: TC
Location: 566779 - 568767 (+)
Gene ID: A19_contig_565_546
Type: TC
Location: 568786 - 569694 (-)
Type: TC
Location: 568786 - 569694 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp003539495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.